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SCNpilot_expt_1000_bf_scaffold_7616_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7616_curated_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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415..885
DNA (471bp) protein (157aa)
Quinohemoprotein alcohol dehydrogenase ADH IIB {ECO:0000313|EMBL:AKH44206.1}; EC=1.1.9.1 {ECO:0000313|EMBL:AKH44206.1};; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Quinohemoprotein alcohol dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQM9_9SPHN
quinohemoprotein alcohol dehydrogenase
SCNpilot_expt_1000_bf_scaffold_7616_curated_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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882..1064
DNA (183bp) protein (61aa)
Quinohemoprotein alcohol dehydrogenase ADH IIB {ECO:0000313|EMBL:AKH44206.1}; EC=1.1.9.1 {ECO:0000313|EMBL:AKH44206.1};; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Quinohemoprotein alcohol dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQM9_9SPHN
quinohemoprotein alcohol dehydrogenase
SCNpilot_expt_1000_bf_scaffold_7616_curated_3
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1378..1551)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NCK5_ERYLH
Zinc-binding protein {ECO:0000313|EMBL:AKH42087.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7616_curated_4
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1548..2522)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y4Y5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48186.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
ribonuclease
SCNpilot_expt_1000_bf_scaffold_7616_curated_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2515..3039)
DNA (525bp) protein (175aa)
Maf-like protein NT2_02_02670 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIL5_9SPHN
Maf-like protein YhdE {ECO:0000313|EMBL:AKH42085.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
nucleotide-binding protein; K06287 septum formation protein
SCNpilot_expt_1000_bf_scaffold_7616_curated_6
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3100..3345)
DNA (246bp) protein (82aa)
Translation initiation factor IF-1 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZS33_9SPHN
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
translation initiation factor IF-1; K02518 translation initiation factor IF-1
SCNpilot_expt_1000_bf_scaffold_7616_curated_7
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3518..6553
DNA (3036bp) protein (1012aa)
Outer membrane receptor protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3A4E6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHL26835.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7616_curated_8
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6608..6931
DNA (324bp) protein (108aa)
UvrABC system protein C n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJ31_9SPHN
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C
Displaying 8 items

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