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SCNpilot_expt_1000_bf_scaffold_4027_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4027_curated_1
unknown

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812..1417
DNA (606bp) protein (202aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4027_curated_2
unknown

Not on your lists

comp(2219..2314)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4027_curated_3
unknown

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comp(2355..2912)
DNA (558bp) protein (186aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4027_curated_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3180..3377
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J639_9SPHN
BFD-like [2Fe-2S] binding domain protein {ECO:0000313|EMBL:AKH42520.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein; K02192 bacterioferritin-associated ferredoxin
SCNpilot_expt_1000_bf_scaffold_4027_curated_5
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3778..4011
DNA (234bp) protein (78aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
Bacterioferritin n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y845_9SPHN
bacterioferritin; K03594 bacterioferritin
SCNpilot_expt_1000_bf_scaffold_4027_curated_6
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4222..4713)
DNA (492bp) protein (164aa)
GTPase Der n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A3R3_9SPHN
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
engA; GTP-binding protein EngA; K03977 GTP-binding protein
SCNpilot_expt_1000_bf_scaffold_4027_curated_7
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

4834..5568
DNA (735bp) protein (245aa)
hypothetical protein PGUG_01202 n=1 Tax=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) RepID=UPI000151ABA9
hypothetical protein
Tax=RBG_16_Acidobacteria_68_9_curated
SCNpilot_expt_1000_bf_scaffold_4027_curated_8
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5774..6379
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YLU8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD49382.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4027_curated_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6395..6703)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA25_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO54594.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4027_curated_10
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7018..8640
DNA (1623bp) protein (541aa)
Trigger factor {ECO:0000313|EMBL:AKH42489.1}; EC=5.2.1.8 {ECO:0000313|EMBL:AKH42489.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Trigger factor n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YL90_9SPHN
tig; trigger factor; K03545 trigger factor
SCNpilot_expt_1000_bf_scaffold_4027_curated_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8794..10905)
DNA (2112bp) protein (704aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEK1_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:ENY81881.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
TonB-dependent receptor
SCNpilot_expt_1000_bf_scaffold_4027_curated_12
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11167..11934
DNA (768bp) protein (256aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
clpP; ATP-dependent Clp protease proteolytic subunit; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y848_9SPHN
SCNpilot_expt_1000_bf_scaffold_4027_curated_13
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12036..12368
DNA (333bp) protein (111aa)
ATP-dependent protease n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003667D40
clpX; ATP-dependent protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000255|HAMAP-Rule:MF_00175}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Displaying 13 items

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