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SCNpilot_expt_1000_bf_scaffold_7477_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7477_curated_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1533
DNA (1533bp) protein (511aa)
Malate synthase G {ECO:0000313|EMBL:AKH42175.1}; EC=2.3.3.9 {ECO:0000313|EMBL:AKH42175.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
malate synthase G (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9]
Malate synthase G n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N8W7_ERYLH
SCNpilot_expt_1000_bf_scaffold_7477_curated_2
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1638..2090
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:KHK91819.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
SCNpilot_expt_1000_bf_scaffold_7477_curated_3
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2065..2883)
DNA (819bp) protein (273aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-
dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Sphingomonas sp. LH128 RepID=J8W3L6_9SPHN
SCNpilot_expt_1000_bf_scaffold_7477_curated_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2880..3662)
DNA (783bp) protein (261aa)
4-hydroxythreonine-4-phosphate dehydrogenase 1 {ECO:0000313|EMBL:AKH42172.1}; EC=1.1.1.262 {ECO:0000313|EMBL:AKH42172.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
pyridoxal phosphate biosynthesis protein; K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y356_9SPHN
SCNpilot_expt_1000_bf_scaffold_7477_curated_5
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3887..4678)
DNA (792bp) protein (264aa)
peptidyl-prolyl cis-trans isomerase SurA (EC:5.2.1.8); K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
Chaperone SurA {ECO:0000256|SAAS:SAAS00043023}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148, ECO:0000313|EMBL:CCA92920.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
Peptidyl-prolyl cis-trans isomerase SurA n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INB8_9SPHN
SCNpilot_expt_1000_bf_scaffold_7477_curated_6
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5494..7824)
DNA (2331bp) protein (777aa)
Organic solvent tolerance protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N8X2_ERYLH
organic solvent tolerance protein; K04744 LPS-assembly protein
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
SCNpilot_expt_1000_bf_scaffold_7477_curated_7
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7926..9392
DNA (1467bp) protein (489aa)
Cytosol aminopeptidase {ECO:0000313|EMBL:AKH42169.1}; EC=3.4.11.1 {ECO:0000313|EMBL:AKH42169.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1]
Probable cytosol aminopeptidase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9Y8_NOVAD
Displaying 7 items

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