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SCNpilot_expt_300_bf_scaffold_3288

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_3288_1
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..887)
DNA (885bp) protein (295aa)
ansB; Asparaginase/glutaminase (EC:3.5.1.1)
AnsB protein {ECO:0000313|EMBL:ABA81515.1}; EC=3.5.1.1 {ECO:0000313|EMBL:ABA81515.1};; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobact
Asparaginase/glutaminase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) RepID=Q3IVB9_RHOS4 rbh
SCNpilot_expt_300_bf_scaffold_3288_2
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(884..1729)
DNA (846bp) protein (282aa)
AP endonuclease, family 2 n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FNT8_PELBH rbh
AP endonuclease, family 2 {ECO:0000313|EMBL:EAU45817.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermud
AP endonuclease, family 2
SCNpilot_expt_300_bf_scaffold_3288_3
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1898..2653
DNA (756bp) protein (252aa)
AABC amino acid transporter, ATPase subunit n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NZ86_9RHOB rbh
AABC amino acid transporter, ATPase subunit {ECO:0000313|EMBL:EAV41765.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="
amino acid ABC transporter ATPase
SCNpilot_expt_300_bf_scaffold_3288_4
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2701..3534
DNA (834bp) protein (278aa)
Polar amino acid ABC transporter, periplasmic polar amino acid-binding protein n=1 Tax=Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) RepID=D5AVC6_RHOCB rbh
polar amino acid ABC transporter periplasmic polar amino acid-binding protein
Polar amino acid ABC transporter, periplasmic polar amino acid-binding protein {ECO:0000313|EMBL:ADE87261.1}; TaxID=272942 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhod
SCNpilot_expt_300_bf_scaffold_3288_5
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3890..4213
DNA (324bp) protein (108aa)
Polar amino acid ABC transporter, permease protein n=1 Tax=Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) RepID=D5AVC5_RHOCB
polar amino acid ABC transporter permease
Polar amino acid ABC transporter, permease protein {ECO:0000313|EMBL:ADE87260.1}; TaxID=272942 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;"
SCNpilot_expt_300_bf_scaffold_3288_6
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4217..4903
DNA (687bp) protein (229aa)
ABC amino acid transporter, inner membrane subunit n=1 Tax=Rhodobacter sphaeroides WS8N RepID=F3U4Y7_RHOSH
gtpD; amino acid ABC transporter membrane protein 2, PAAT family
GtpD protein {ECO:0000313|EMBL:ABA81511.1}; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (stra
SCNpilot_expt_300_bf_scaffold_3288_7
Rhodobacter sp. AKP1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4903..6327
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. AKP1 RepID=L1KAF4_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EKX57460.1}; TaxID=1247725 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. A
hypothetical protein
SCNpilot_expt_300_bf_scaffold_3288_8
unknown

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comp(6708..6962)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3288_9
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7354..7761
DNA (408bp) protein (136aa)
Arginino succinate lyase (EC:4.3.2.1)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_0000
Argininosuccinate lyase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NZ90_9RHOB
SCNpilot_expt_300_bf_scaffold_3288_10
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7873..8886
DNA (1014bp) protein (338aa)
Sugar isomerase domain protein n=1 Tax=Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) RepID=D5AVS1_RHOCB rbh
sugar isomerase domain-containing protein
Sugar isomerase domain protein {ECO:0000313|EMBL:ADE87406.1}; TaxID=272942 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter
SCNpilot_expt_300_bf_scaffold_3288_11
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8938..9180
DNA (243bp) protein (81aa)
Putative sugar kinase protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NZ92_9RHOB
Putative sugar kinase protein {ECO:0000313|EMBL:EAV41771.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggr
putative kinase
Displaying 11 items

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