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SCNpilot_expt_300_bf_scaffold_1080

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1080_1
unknown

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1..360
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1080_2
unknown

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357..608
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1080_3
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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605..1033
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZLG6_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14342.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1080_4
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1092..1505
DNA (414bp) protein (138aa)
Single-stranded DNA-binding protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AUL0_9RHOO
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1348657 species="Bacteria; Proteobacteria; Bet
single-stranded DNA-binding protein
SCNpilot_expt_300_bf_scaffold_1080_5

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1641..2810
DNA (1170bp) protein (390aa)
Transposase of ISCARN93, IS4 family IS4Sa group n=1 Tax=mine drainage metagenome RepID=E6QTD3_9ZZZZ rbh
Transposase of ISCARN93, IS4 family IS4Sa group {ECO:0000313|EMBL:CBI10505.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transposase IS4
SCNpilot_expt_300_bf_scaffold_1080_6
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2838..3410
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000345198D
Glycine zipper 2TM domain containing protein {ECO:0000313|EMBL:KIF80986.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" sou
rickettsia 17 kDa surface antigen family protein
SCNpilot_expt_300_bf_scaffold_1080_7

Not on your lists

3414..3635
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=U3LPN5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGH89230.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_300_bf_scaffold_1080_8
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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3790..4554
DNA (765bp) protein (255aa)
Plasmid replication protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZAN7_9RHOO rbh
Plasmid replication protein {ECO:0000313|EMBL:EPZ14340.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu
plasmid replication protein
SCNpilot_expt_300_bf_scaffold_1080_9
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4551..5723
DNA (1173bp) protein (391aa)
Plasmid-partitioning protein ParB n=1 Tax=Xylella fastidiosa 6c RepID=V8K1Q8_XYLFS rbh
plasmid replication/partition protein
Probable plasmid-partitioning protein ParB; TaxID=160492 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa (strain 9a5c).
SCNpilot_expt_300_bf_scaffold_1080_10
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5989..6363
DNA (375bp) protein (125aa)
transcriptional regulator n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377B1C
Uncharacterized protein {ECO:0000313|EMBL:EPZ14337.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
transcriptional regulator
SCNpilot_expt_300_bf_scaffold_1080_11
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6501..7445
DNA (945bp) protein (315aa)
TrfA family protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZAN2_9RHOO
TrfA family protein {ECO:0000313|EMBL:EPZ14335.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
TrfA family protein
SCNpilot_expt_300_bf_scaffold_1080_12

Not on your lists

comp(8353..8760)
DNA (408bp) protein (136aa)
Regulator with HTH domain protein n=1 Tax=mine drainage metagenome RepID=T0Y8J9_9ZZZZ
Regulator with HTH domain protein {ECO:0000313|EMBL:EQD29473.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
XRE family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_1080_13
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8757..9041)
DNA (285bp) protein (95aa)
hypothetical protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
hypothetical protein id=12495571 bin=THIO_HI species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1080_14
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9191..10195
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZIA4_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPZ14331.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
Displaying 14 items

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