ggKbase home page

SCNpilot_expt_300_bf_scaffold_1216

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1216_1
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(267..1184)
DNA (918bp) protein (306aa)
Ync n=1 Tax=Rhizobium radiobacter RepID=Q9R479_RHIRD rbh
Uncharacterized protein {ECO:0000313|EMBL:KKC37993.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudi
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1216_2
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1174..2013)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036D5304 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKC37994.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudi
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1216_3
bacterium YEK0313, Bacteria

Not on your lists

comp(2470..3570)
DNA (1101bp) protein (367aa)
Transcriptional regulator, LuxR family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3J6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CEJ10038.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
LuxR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_1216_4
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3648..4187)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EMM7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KHJ54052.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensi
invasion associated locus B family protein
SCNpilot_expt_300_bf_scaffold_1216_5
bacterium YEK0313, Bacteria

Not on your lists

comp(4277..7156)
DNA (2880bp) protein (960aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TNW4_MESCW rbh
Extracellular serine protease {ECO:0000313|EMBL:CEJ10039.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
outer membrane autotransporter barrel domain protein
SCNpilot_expt_300_bf_scaffold_1216_6
bacterium YEK0313, Bacteria

Not on your lists

comp(7329..8990)
DNA (1662bp) protein (554aa)
Outer membrane autotransporter barrel domain n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FKC7_9RHOB
Extracellular serine protease {ECO:0000313|EMBL:CEJ14645.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
outer membrane autotransporter barrel domain protein
SCNpilot_expt_300_bf_scaffold_1216_7
unknown

Not on your lists

comp(8984..9613)
DNA (630bp) protein (210aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1216_8
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9610..10794)
DNA (1185bp) protein (395aa)
UPI0003CE10A3 related cluster n=1 Tax=unknown RepID=UPI0003CE10A3
Transposase {ECO:0000313|EMBL:KKC31371.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
putative transposase of undefined mobile element
SCNpilot_expt_300_bf_scaffold_1216_9
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10798..11706)
DNA (909bp) protein (303aa)
integrase, partial n=1 Tax=Rhizobium leguminosarum RepID=UPI00038187C9 rbh
Integrase {ECO:0000313|EMBL:KKB75883.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
putative transposase number 1 for insertion sequence NGRIS-16f
SCNpilot_expt_300_bf_scaffold_1216_10
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12018..12815
DNA (798bp) protein (266aa)
Integrase/recombinase n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U5T6_9PROT
Integrase {ECO:0000313|EMBL:KKB75883.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
putative integrase/recombinase
Displaying 10 items

View Taxonomy