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SCNpilot_expt_300_bf_scaffold_2303

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_2303_1
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..408)
DNA (408bp) protein (136aa)
Putative integrase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ICA8_9SPHN
putative integrase
Putative integrase {ECO:0000313|EMBL:CCA89933.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium s
SCNpilot_expt_300_bf_scaffold_2303_2
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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522..1265
DNA (744bp) protein (248aa)
Conjugal transfer coupling protein TraG n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BT20_9RHIZ
Conjugal transfer protein TraG {ECO:0000313|EMBL:EZQ12939.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
conjugal transfer protein
SCNpilot_expt_300_bf_scaffold_2303_3
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1396..1698
DNA (303bp) protein (101aa)
Nuclease SNase-like protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SAU5_RHIET
Uncharacterized protein {ECO:0000313|EMBL:EZQ12938.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzan
nuclease SNase-like protein
SCNpilot_expt_300_bf_scaffold_2303_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1963..2529)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFF1_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EGP54456.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Ag
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2303_5
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3022..3585)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JSW2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ELT51208.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium
SCNpilot_expt_300_bf_scaffold_2303_6
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3980..4528)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UC43_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EGP55051.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Ag
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2303_7
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4993..5433)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X7Z9_OCHA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS17353.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (st
SCNpilot_expt_300_bf_scaffold_2303_8
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5928..6308
DNA (381bp) protein (127aa)
WGR n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YIJ6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB86137.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2303_9
unknown

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comp(6287..6469)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2303_10
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6529..6840)
DNA (312bp) protein (104aa)
Phosphatidyl-N-methylethanolamine N-methyltransferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HBI6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KKB86136.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2303_11
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7592..8521)
DNA (930bp) protein (310aa)
ArdC antirestriction protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035FC3C7 rbh
ArdC antirestriction protein {ECO:0000313|EMBL:KFL29759.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;
ardC; antirestriction protein
SCNpilot_expt_300_bf_scaffold_2303_12
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8763..8948)
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QRL8_9RHOB
Helicase {ECO:0000313|EMBL:KKB86134.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2303_13
unknown

Not on your lists

9350..9493
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 13 items

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