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SCNpilot_expt_300_bf_scaffold_689

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_689_1
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130..1500)
DNA (1371bp) protein (457aa)
Transposase TnpA, ISL3 family n=1 Tax=Xanthomonas oryzae pv. oryzae (strain PXO99A) RepID=B2SSB8_XANOP
tnpA; transposase TnpA, ISL3 family
Il-IS_2, transposase {ECO:0000313|EMBL:AGA31734.1}; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivi
SCNpilot_expt_300_bf_scaffold_689_2
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1505..1846)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B2AJJ8_CUPTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP64251.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwane
SCNpilot_expt_300_bf_scaffold_689_3
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1846..2169)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NX03_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI10411.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (
SCNpilot_expt_300_bf_scaffold_689_4
unknown

Not on your lists

comp(2170..2463)
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_689_5
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2460..2849)
DNA (390bp) protein (130aa)
Uncharacterized protein n=3 Tax=Azotobacter vinelandii RepID=M9XX41_AZOVI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO81114.1}; TaxID=322710 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinela
SCNpilot_expt_300_bf_scaffold_689_6
Photorhabdus luminescens, Photorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2846..3136)
DNA (291bp) protein (97aa)
DNA polymerase, beta-like region-containing protein n=3 Tax=Azotobacter vinelandii RepID=C1DLC0_AZOVD
Nucleotidyltransferase {ECO:0000313|EMBL:KGM28925.1}; TaxID=29488 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Photorhabdus.;" source="Photorhabdus lu
DNA polymerase, beta-like region-containing protein
SCNpilot_expt_300_bf_scaffold_689_7
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3459..4199)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q91UR0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KCB36890.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-2
SCNpilot_expt_300_bf_scaffold_689_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5031..6986)
DNA (1956bp) protein (652aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A4F82 rbh
integrase family protein Tax=GWE1_Thiobacillus_62_9_curated
integrase family protein
SCNpilot_expt_300_bf_scaffold_689_9
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7102..8364)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=2 Tax=Ralstonia pickettii RepID=B2UKF3_RALPJ rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ74830.1}; TaxID=1264675 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii
SCNpilot_expt_300_bf_scaffold_689_10
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8432..9211)
DNA (780bp) protein (260aa)
Gp37Gp68 family protein n=2 Tax=Ralstonia pickettii RepID=B2UKF4_RALPJ rbh
Bacteriophage protein gp37 {ECO:0000313|EMBL:EWS61739.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
Gp37Gp68 family protein
SCNpilot_expt_300_bf_scaffold_689_11
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9208..9846)
DNA (639bp) protein (213aa)
Peptidase S24 and S26 domain protein n=2 Tax=Ralstonia pickettii RepID=B2UKF5_RALPJ
peptidase S24
Peptidase S24 {ECO:0000313|EMBL:AJW46134.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
SCNpilot_expt_300_bf_scaffold_689_12
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9952..10803)
DNA (852bp) protein (284aa)
Uncharacterized protein n=2 Tax=Ralstonia pickettii RepID=B2UKF6_RALPJ rbh
Uncharacterized protein {ECO:0000313|EMBL:KGH13004.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Ps
hypothetical protein
SCNpilot_expt_300_bf_scaffold_689_13
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10857..12047)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BTL5_XANC5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ23844.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campes
SCNpilot_expt_300_bf_scaffold_689_14
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12040..14094)
DNA (2055bp) protein (685aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W8W4_ACISJ rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM42689.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
SCNpilot_expt_300_bf_scaffold_689_15
Buttiauxella agrestis, Buttiauxella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14091..16874)
DNA (2784bp) protein (928aa)
Type II restriction enzyme, methylase subunit {ECO:0000313|EMBL:KFC79766.1}; EC=2.1.1.- {ECO:0000313|EMBL:KFC79766.1};; TaxID=1006004 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobact
Putative DNA methylase n=1 Tax=Escherichia coli ECC-1470 RepID=V6P5E4_ECOLX rbh
DNA methylase rbh
SCNpilot_expt_300_bf_scaffold_689_16
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17056..17343)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003777909
hypothetical protein Tax=CG_Beta_01
SCNpilot_expt_300_bf_scaffold_689_17
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17525..18187)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003692264
Uncharacterized protein {ECO:0000313|EMBL:EXI79874.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_689_18
CG_Desulfovib_01, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18189..18503)
DNA (315bp) protein (105aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K03502 DNA polymerase V Tax=CG_Desulfovib_01
UMUC domain protein DNA-repair protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GIP6_NITSI
UMUC domain-containing protein DNA-repair protein
Displaying 18 items

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