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SCNpilot_expt_300_bf_scaffold_699

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_699_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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432..1160
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLM7_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO23396.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
hypothetical protein
SCNpilot_expt_300_bf_scaffold_699_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1273..4038
DNA (2766bp) protein (922aa)
magnesium-transporting ATPase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377B60 rbh
Magnesium-transporting ATPase MgtA {ECO:0000313|EMBL:GAO23397.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
magnesium ABC transporter ATPase
SCNpilot_expt_300_bf_scaffold_699_3
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4049..4765
DNA (717bp) protein (239aa)
methyltransferase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377B61 rbh
Mg2+ transport ATPase protein C {ECO:0000313|EMBL:GAO23398.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyclip
mgtC1; Mg2+ transport ATPase
SCNpilot_expt_300_bf_scaffold_699_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4777..5391)
DNA (615bp) protein (205aa)
TniR protein n=1 Tax=Pseudomonas putida ND6 RepID=I3UT35_PSEPU rbh
Resolvase domain-containing protein {ECO:0000313|EMBL:GAO23399.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicy
TniR protein
SCNpilot_expt_300_bf_scaffold_699_5

Not on your lists

comp(5452..6669)
DNA (1218bp) protein (406aa)
TniQ n=1 Tax=Comamonas sp. B-9 RepID=UPI0002E26693 rbh
tniQ; transposon related protein TniQ
Tn6048 family protein TniQ {ECO:0000313|EMBL:AEV56858.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_300_bf_scaffold_699_6
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6666..7574)
DNA (909bp) protein (303aa)
TniB n=1 Tax=Curvibacter lanceolatus RepID=UPI00035DA1A8 rbh
TniB family protein
NTP-binding protein TniB (Tn6048) {ECO:0000313|EMBL:ABF11835.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia
SCNpilot_expt_300_bf_scaffold_699_7
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7577..9259)
DNA (1683bp) protein (561aa)
transposase TniA n=1 Tax=Comamonas sp. B-9 RepID=UPI0003959388 rbh
integrase catalytic subunit
Integrase, catalytic region {ECO:0000313|EMBL:ABO60116.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia com
SCNpilot_expt_300_bf_scaffold_699_8
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9395..9649
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Proteobacteria RepID=Q3BT38_XANC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ24021.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campes
SCNpilot_expt_300_bf_scaffold_699_9
Achromobacter denitrificans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9642..10790
DNA (1149bp) protein (383aa)
HsdFM n=1 Tax=Achromobacter denitrificans RepID=T2K1C8_ACHDE rbh
HsdFM {ECO:0000313|EMBL:CCU56617.1}; TaxID=32002 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter denitrificans (Alcaligen
C-5 cytosine-specific DNA methylase
SCNpilot_expt_300_bf_scaffold_699_10
Achromobacter denitrificans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10790..11719
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Achromobacter denitrificans RepID=T2K1A2_ACHDE rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU56618.1}; TaxID=32002 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter denitr
hypothetical protein
SCNpilot_expt_300_bf_scaffold_699_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11716..12126
DNA (411bp) protein (137aa)
DNA mismatch endonuclease of very short patch repair n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3A8A4_PSEAI
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI78380.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source=
DNA mismatch endonuclease vsr
SCNpilot_expt_300_bf_scaffold_699_12
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12263..13246)
DNA (984bp) protein (328aa)
Trypsin domain-containing protein n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3ASD6_PSEAI
trypsin domain-containing protein
Trypsin domain protein {ECO:0000313|EMBL:AAU92378.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus cap
SCNpilot_expt_300_bf_scaffold_699_13
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13233..13454)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XN14_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KFJ90151.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-
SCNpilot_expt_300_bf_scaffold_699_14
Roseobacter denitrificans, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13522..15582)
DNA (2061bp) protein (687aa)
Mobilization protein n=1 Tax=Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1739 RepID=U6QQI3_SALET rbh
mobL; mobilization protein
Mobilization protein {ECO:0000313|EMBL:ABI93471.1}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter denitrifi
SCNpilot_expt_300_bf_scaffold_699_15
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15781..16092
DNA (312bp) protein (104aa)
MobC n=1 Tax=Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1739 RepID=U6QUD7_SALET
Uncharacterized protein {ECO:0000313|EMBL:KJW76573.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae compl
mobilization protein C
SCNpilot_expt_300_bf_scaffold_699_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16126..18663
DNA (2538bp) protein (846aa)
TraG n=1 Tax=Pseudomonas aeruginosa RepID=M1RSX5_PSEAI rbh
TraG {ECO:0000313|EMBL:AGG19206.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
conjugal transfer protein TraG
SCNpilot_expt_300_bf_scaffold_699_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18678..19046
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa HB13 RepID=U1DQG5_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AKH45393.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugi
SCNpilot_expt_300_bf_scaffold_699_18
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19139..19609)
DNA (471bp) protein (157aa)
Putative endonuclease n=1 Tax=Thauera sp. 28 RepID=N6YFD0_9RHOO
nuclease Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
nuclease
SCNpilot_expt_300_bf_scaffold_699_19
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19606..20517)
DNA (912bp) protein (304aa)
KfrA protein n=1 Tax=Pseudomonas aeruginosa RepID=A7MAI0_PSEAI rbh
KfrA protein {ECO:0000313|EMBL:AJW29861.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. LM16.;"
kfrA; transcriptional regulator KfrA
SCNpilot_expt_300_bf_scaffold_699_20
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21425..22294)
DNA (870bp) protein (290aa)
TrfA family protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VX05_POLNA rbh
TrfA family protein
TrfA family protein {ECO:0000313|EMBL:ABM40183.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivo
SCNpilot_expt_300_bf_scaffold_699_21
unknown

Not on your lists

comp(22305..22508)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_699_22
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22551..22820)
DNA (270bp) protein (90aa)
Plasmid segregation protein ParG n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XMK5_9XANT
Plasmid segregation protein ParG {ECO:0000313|EMBL:CCF70435.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomo
hypothetical protein
Displaying 22 items

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