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SCNpilot_expt_300_bf_scaffold_7817

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_7817_1
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..756)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036C120A
Uncharacterized protein {ECO:0000313|EMBL:EQA97293.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
SCNpilot_expt_300_bf_scaffold_7817_2
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(812..2881)
DNA (2070bp) protein (690aa)
DNA methylase N-4 n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HA70_9SPHN rbh
DNA methylase N-4 {ECO:0000313|EMBL:EQB13226.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosute
DNA/RNA helicase
SCNpilot_expt_300_bf_scaffold_7817_3
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3371..3634)
DNA (264bp) protein (88aa)
UPF0335 protein Sala_0339 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GWB0_SPHAL
hypothetical protein
UPF0335 protein Sala_0339 {ECO:0000256|HAMAP-Rule:MF_00797}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy
SCNpilot_expt_300_bf_scaffold_7817_4
unknown

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comp(3703..4173)
DNA (471bp) protein (157aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_7817_5
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4347..5411
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HM63_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJR24540.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
putative transcriptional regulator
SCNpilot_expt_300_bf_scaffold_7817_6
unknown

Not on your lists

5413..5628
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_7817_7
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5632..6030
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=T0GUM3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHA63576.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
SCNpilot_expt_300_bf_scaffold_7817_8
unknown

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6077..6202
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_7817_9
unknown

Not on your lists

6199..6414
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_7817_10
unknown

Not on your lists

6632..6967
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_7817_11

Not on your lists

6967..7308
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VFL5_RHOPX
Uncharacterized protein {ECO:0000313|EMBL:KKL44949.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_7817_12
unknown

Not on your lists

7308..7748
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_7817_13

Not on your lists

7745..8134
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Mycobacterium abscessus M94 RepID=I0PUT6_MYCAB
Uncharacterized protein {ECO:0000313|EMBL:KKM87224.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_300_bf_scaffold_7817_14
unknown

Not on your lists

8146..8469
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_7817_15
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8638..9204
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NSW9_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI71498.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp
SCNpilot_expt_300_bf_scaffold_7817_16
unknown

Not on your lists

9233..9412
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_7817_17
unknown

Not on your lists

9409..9621
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_7817_18

Not on your lists

9632..9883
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL82355.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_300_bf_scaffold_7817_19
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9876..10463
DNA (588bp) protein (196aa)
UPI0003CDDD30 related cluster n=1 Tax=unknown RepID=UPI0003CDDD30
Uncharacterized protein {ECO:0000313|EMBL:ESY89038.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
SCNpilot_expt_300_bf_scaffold_7817_20
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10460..10678
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8W3P6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU14948.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
SCNpilot_expt_300_bf_scaffold_7817_21
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10675..11448
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Erwinia sp. (strain Ejp617) RepID=E3DG65_ERWSE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIO32387.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
SCNpilot_expt_300_bf_scaffold_7817_22
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11445..11717
DNA (273bp) protein (91aa)
Uncharacterized protein {ECO:0000313|EMBL:KEZ17702.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoi
SCNpilot_expt_300_bf_scaffold_7817_23
unknown

Not on your lists

11714..11866
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_7817_24
unknown

Not on your lists

11863..12393
DNA (531bp) protein (177aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_7817_25
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12393..12968
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2Q977_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL36577.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source
hypothetical protein
Displaying 25 items

View Taxonomy