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SCNpilot_expt_300_bf_scaffold_9801

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_9801_1
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..100
DNA (99bp) protein (33aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00037210D1
Two-component response regulator {ECO:0000313|EMBL:KKC32136.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrop
SCNpilot_expt_300_bf_scaffold_9801_2
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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212..379
DNA (168bp) protein (56aa)
UPI0003D02BB8 related cluster n=1 Tax=unknown RepID=UPI0003D02BB8
UPF0391 membrane protein VW35_07535 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s
hypothetical protein
SCNpilot_expt_300_bf_scaffold_9801_3
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(534..734)
DNA (201bp) protein (67aa)
CsbD-like protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MH44_9RHIZ
CsbD-like protein {ECO:0000313|EMBL:EKF20035.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacifi
CsbD-like protein
SCNpilot_expt_300_bf_scaffold_9801_4
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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869..1651
DNA (783bp) protein (261aa)
Histidine ABC transporter, ATP-binding protein HisP n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7H8_PELHB
Amino acid transporter {ECO:0000313|EMBL:KKB84294.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
histidine ABC transporter ATP-binding protein HisP
SCNpilot_expt_300_bf_scaffold_9801_5
bacterium YEK0313, Bacteria

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1654..2250
DNA (597bp) protein (199aa)
protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific (EC:2.1.1.72)
Putative methylase n=1 Tax=Bosea sp. AJ110407 RepID=B2DEV7_9BRAD
50S ribosomal protein L3 glutamine methyltransferase {ECO:0000313|EMBL:CEJ14037.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_expt_300_bf_scaffold_9801_6
bacterium YEK0313, Bacteria

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2258..2488
DNA (231bp) protein (77aa)
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Xanthobacteraceae RepID=UPI000361CC7F
50S ribosomal protein L3 glutamine methyltransferase {ECO:0000313|EMBL:CEJ14037.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SAM-dependent methyltransferase
SCNpilot_expt_300_bf_scaffold_9801_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2612..3373
DNA (762bp) protein (254aa)
His/Glu/Gln/Arg/opine family ABC transporter, periplasmic His/Glu/Gln/Arg/opine family-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7H9_PELHB
Amino acid ABC transporter {ECO:0000313|EMBL:KFL30421.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
His/Glu/Gln/Arg/opine family ABC transporter substrate-binding protein
SCNpilot_expt_300_bf_scaffold_9801_8
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3426..3800
DNA (375bp) protein (125aa)
ABC transporter, permease protein, HisMQ family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7I0_PELHB
ABC transporter, permease protein, HisMQ family {ECO:0000313|EMBL:CDP50340.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="
ABC transporter permease, HisMQ family
Displaying 8 items

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