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SCNpilot_expt_300_bf_scaffold_1307

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Displaying 8 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1307_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2..397
DNA (396bp) protein (132aa)
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DS33_9PROT
Glycosyl transferase {ECO:0000313|EMBL:KIO48891.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpA
glycosyl transferase family protein
SCNpilot_expt_300_bf_scaffold_1307_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(424..846)
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KIO47842.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
SCNpilot_expt_300_bf_scaffold_1307_3
unknown

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comp(1076..1201)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1307_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1523..3262
DNA (1740bp) protein (580aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase III, tau subunit {ECO:0000313|EMBL:ABB75153.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABB75153.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosom
DNA polymerase III, tau subunit n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7W8_NITMU rbh
SCNpilot_expt_300_bf_scaffold_1307_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3276..3602
DNA (327bp) protein (109aa)
Nucleoid-associated protein EBAPG3_16000 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIV1_9PROT
Nucleoid-associated protein SQ11_14950 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1307_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3946..4554
DNA (609bp) protein (203aa)
Recombination protein RecR n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ89_9PROT rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; N
recR; recombination protein RecR
SCNpilot_expt_300_bf_scaffold_1307_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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4999..5793
DNA (795bp) protein (265aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887, ECO:0000313|EMBL:KIO47891.1}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Ni
Pseudouridine synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7X1_NITMU rbh
pseudouridine synthase Rsu
SCNpilot_expt_300_bf_scaffold_1307_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5812..6708)
DNA (897bp) protein (299aa)
50S ribosomal protein L3 glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02125}; Short=L3 MTase {ECO:0000256|HAMAP-Rule:MF_02125};; EC=2.1.1.298 {ECO:0000256|HAMAP-Rule:MF_02125};; N5-glutamine
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (EC:2.1.1.72)
50S ribosomal protein L3 glutamine methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DT44_9PROT rbh
Displaying 8 items

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