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SCNpilot_expt_300_bf_scaffold_224

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_224_1
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

250..933
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRY0_9GAMM
hypothetical protein Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_224_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(937..1671)
DNA (735bp) protein (245aa)
GMP synthase family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ31_9GAMM
GMP synthase family protein
GMP synthase family protein {ECO:0000313|EMBL:AGG90893.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacte
SCNpilot_expt_300_bf_scaffold_224_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1668..3512)
DNA (1845bp) protein (615aa)
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=1 Tax=Rhodanobacter sp. 115 RepID=I4WA21_9GAMM rbh
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB {ECO:0000313|EMBL:EIL96312.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xan
type II secretion system protein E
SCNpilot_expt_300_bf_scaffold_224_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3611..4522
DNA (912bp) protein (304aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA syntheta
glycyl-tRNA synthetase n=1 Tax=Dyella japonica RepID=UPI0002E78467 rbh
glycyl-tRNA synthetase
SCNpilot_expt_300_bf_scaffold_224_5
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4519..6672
DNA (2154bp) protein (718aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetas
Glycine--tRNA ligase beta subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFK0_9GAMM
glycyl-tRNA synthetase subunit beta
SCNpilot_expt_300_bf_scaffold_224_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6751..7377)
DNA (627bp) protein (209aa)
Putative transcription factor, MBF1 like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRY5_9GAMM
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_224_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7700..8563
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQP7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89538.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
hypothetical protein
SCNpilot_expt_300_bf_scaffold_224_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8653..10497)
DNA (1845bp) protein (615aa)
Phospholipase/lecithinase/hemolysin n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGM2_9GAMM
Phospholipase/lecithinase/hemolysin {ECO:0000313|EMBL:EIL98613.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
phospholipase/lecithinase/hemolysin
SCNpilot_expt_300_bf_scaffold_224_9
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10614..12893)
DNA (2280bp) protein (760aa)
transcription accessory protein n=1 Tax=Dyella ginsengisoli RepID=UPI000345D3E5
transcription accessory protein
Transcription accessory protein {ECO:0000313|EMBL:AIF46243.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonic
SCNpilot_expt_300_bf_scaffold_224_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13087..13893)
DNA (807bp) protein (269aa)
Putative membrane protein/domain protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NM56_9GAMM rbh
putative membrane protein/domain protein
Putative membrane protein/domain protein {ECO:0000313|EMBL:AGG90743.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source=
SCNpilot_expt_300_bf_scaffold_224_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13974..15848)
DNA (1875bp) protein (625aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Rhodanobacter sp. 115 RepID=I4WA12_9GAMM rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1162282 species="Bacte
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein
SCNpilot_expt_300_bf_scaffold_224_12
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16415..16600
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000306BEFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF46239.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_expt_300_bf_scaffold_224_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16760..19405)
DNA (2646bp) protein (882aa)
Aminopeptidase N n=1 Tax=Rhodanobacter sp. 115 RepID=I4WA10_9GAMM rbh
Aminopeptidase N {ECO:0000313|EMBL:EIL96301.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.
aminopeptidase N
SCNpilot_expt_300_bf_scaffold_224_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19484..20482
DNA (999bp) protein (333aa)
Galactose mutarotase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGL4_9GAMM rbh
Galactose mutarotase {ECO:0000313|EMBL:EIL98605.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thio
galactose mutarotase-like enzyme
SCNpilot_expt_300_bf_scaffold_224_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20479..21432
DNA (954bp) protein (318aa)
Putative pyridoxal-phosphate dependent enzyme n=2 Tax=Rhodanobacter sp. 115 RepID=I4WSR0_9GAMM rbh
Putative pyridoxal-phosphate dependent enzyme {ECO:0000313|EMBL:EIL96299.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" s
threonine dehydratase
SCNpilot_expt_300_bf_scaffold_224_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21434..22588)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WA07_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL96298.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
sterol desaturase
SCNpilot_expt_300_bf_scaffold_224_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22635..23516)
DNA (882bp) protein (294aa)
Integral membrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQN9_9GAMM
Integral membrane protein {ECO:0000313|EMBL:EIL89530.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
putative permease, DMT superfamily
SCNpilot_expt_300_bf_scaffold_224_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23616..24176
DNA (561bp) protein (187aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGL0_9GAMM rbh
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:EIL98601.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhoda
SCNpilot_expt_300_bf_scaffold_224_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24448..25194
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WN29_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM00871.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
SCNpilot_expt_300_bf_scaffold_224_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25272..26117
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WN28_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM00870.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
SCNpilot_expt_300_bf_scaffold_224_21
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26197..27870)
DNA (1674bp) protein (558aa)
aminopeptidase n=1 Tax=Dyella ginsengisoli RepID=UPI00034A12BC
Aminopeptidase {ECO:0000313|EMBL:GAN45059.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedimi
putative aminopeptidase
SCNpilot_expt_300_bf_scaffold_224_22
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27985..29010
DNA (1026bp) protein (342aa)
LacI family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WQX6_9GAMM
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:AHX15652.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella j
SCNpilot_expt_300_bf_scaffold_224_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29185..30147)
DNA (963bp) protein (321aa)
Enterochelin esterase-like enzyme n=1 Tax=Rhodanobacter denitrificans RepID=M4NRI4_9GAMM rbh
enterochelin esterase-like enzyme
Enterochelin esterase-like enzyme {ECO:0000313|EMBL:AGG90166.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacte
SCNpilot_expt_300_bf_scaffold_224_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30144..31619)
DNA (1476bp) protein (492aa)
MFS transporter n=1 Tax=Dyella ginsengisoli RepID=UPI0003465AED rbh
Major Facilitator Superfamily transporter
Major Facilitator Superfamily transporter {ECO:0000313|EMBL:AGG90175.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhod
SCNpilot_expt_300_bf_scaffold_224_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31616..33805)
DNA (2190bp) protein (730aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRR2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02154.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
SCNpilot_expt_300_bf_scaffold_224_26
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33925..36285)
DNA (2361bp) protein (787aa)
Alpha-glucosidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7N3_9GAMM rbh
Alpha-glucosidase {ECO:0000313|EMBL:EIL95474.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115
family 31 glycosyl hydrolase, alpha-glucosidase
SCNpilot_expt_300_bf_scaffold_224_27
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36305..37870)
DNA (1566bp) protein (522aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rho
Alpha amylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRR6_9GAMM rbh
glycosidase
SCNpilot_expt_300_bf_scaffold_224_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37903..39453)
DNA (1551bp) protein (517aa)
Tryptophan halogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRR7_9GAMM rbh
Tryptophan halogenase {ECO:0000313|EMBL:EIM02159.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thi
Tryptophan halogenase
SCNpilot_expt_300_bf_scaffold_224_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39545..42073)
DNA (2529bp) protein (843aa)
Outer membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQW3_9GAMM rbh
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AGG90168.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
SCNpilot_expt_300_bf_scaffold_224_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42074..42451)
DNA (378bp) protein (126aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter denitrificans RepID=M4NKG0_9GAMM
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AGG90168.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
Displaying items 1-30 of 49 in total

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