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SCNpilot_expt_300_bf_scaffold_279

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_279_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1251)
DNA (1251bp) protein (417aa)
xanthomonas adhesin protein, partial n=1 Tax=Xanthomonas sacchari RepID=UPI00026315E3
Repetitive surface protein {ECO:0000313|EMBL:EQM81701.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas ma
repetitive surface protein
SCNpilot_expt_300_bf_scaffold_279_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1429..3408)
DNA (1980bp) protein (660aa)
Protease n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPJ2_9GAMM rbh
Protease {ECO:0000313|EMBL:EIL89133.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
protease
SCNpilot_expt_300_bf_scaffold_279_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3750..4571
DNA (822bp) protein (274aa)
Mg-dependent DNase (EC:3.1.21.-)
Mg-dependent DNase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPJ3_9GAMM
Mg-dependent DNase {ECO:0000313|EMBL:EIL89134.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus
SCNpilot_expt_300_bf_scaffold_279_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4741..5277)
DNA (537bp) protein (179aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad
pseudouridine synthase family protein (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WPY1_9GAMM rbh
SCNpilot_expt_300_bf_scaffold_279_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5303..6151)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMS1_9GAMM
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:AGG90790.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" so
SCNpilot_expt_300_bf_scaffold_279_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6228..6890)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2Q2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93743.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
SCNpilot_expt_300_bf_scaffold_279_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6974..7894)
DNA (921bp) protein (307aa)
Transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WMS4_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EIL98162.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
transcriptional regulator
SCNpilot_expt_300_bf_scaffold_279_8
unknown

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7997..8206
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_279_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8308..9255
DNA (948bp) protein (316aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2P8_9GAMM rbh
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:EIL93739.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
putative oxidoreductase, aryl-alcohol dehydrogenase like protein
SCNpilot_expt_300_bf_scaffold_279_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9256..10353)
DNA (1098bp) protein (366aa)
GumN protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJN6_9GAMM rbh
GumN protein {ECO:0000313|EMBL:EIL87427.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
GumN protein
SCNpilot_expt_300_bf_scaffold_279_11
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10803..13031)
DNA (2229bp) protein (743aa)
Isocitrate dehydrogenase {ECO:0000313|EMBL:AHX14950.1}; EC=1.1.1.42 {ECO:0000313|EMBL:AHX14950.1};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJN7_9GAMM
SCNpilot_expt_300_bf_scaffold_279_12

Not on your lists

comp(13384..13674)
DNA (291bp) protein (97aa)
Plasmid stability protein n=2 Tax=mine drainage metagenome RepID=T1AFA1_9ZZZZ
Plasmid stability protein {ECO:0000313|EMBL:EQD59166.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
plasmid stability protein
SCNpilot_expt_300_bf_scaffold_279_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14049..16043
DNA (1995bp) protein (665aa)
5'-nucleotidase domain-containing protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQM4_9GAMM rbh
5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase
5'-nucleotidase domain-containing protein {ECO:0000313|EMBL:EIL89515.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
SCNpilot_expt_300_bf_scaffold_279_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16138..17349
DNA (1212bp) protein (404aa)
Major facilitator superfamily protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4R4_9GAMM
Major facilitator superfamily protein {ECO:0000313|EMBL:EIL94455.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
major facilitator superfamily transporter
SCNpilot_expt_300_bf_scaffold_279_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17350..17814)
DNA (465bp) protein (155aa)
DNA-(apurinic or apyrimidinic site) lyase / pyrimidine dimer DNA glycosylase (EC:3.2.2.17 4.2.99.18)
Pyrimidine dimer DNA glycosylase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKJ9_9GAMM
Pyrimidine dimer DNA glycosylase {ECO:0000313|EMBL:EIL87740.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
SCNpilot_expt_300_bf_scaffold_279_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17886..19169)
DNA (1284bp) protein (428aa)
Cytochrome c, class I n=1 Tax=Rhodanobacter denitrificans RepID=I4WKA4_9GAMM
cytochrome c, mono- and diheme variants family
Cytochrome c, mono-and diheme variants family {ECO:0000313|EMBL:AGG90704.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
SCNpilot_expt_300_bf_scaffold_279_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19166..19900)
DNA (735bp) protein (245aa)
Cytochrome c n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXY6_9GAMM
Cytochrome c {ECO:0000313|EMBL:EIL92077.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli
cytochrome c553
SCNpilot_expt_300_bf_scaffold_279_18
unknown

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20053..20217
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_279_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20309..21466
DNA (1158bp) protein (386aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomona
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCD7_9GAMM
SCNpilot_expt_300_bf_scaffold_279_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21463..22461
DNA (999bp) protein (333aa)
homoserine kinase (EC:2.7.1.39)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
Homoserine kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NM15_9GAMM rbh
SCNpilot_expt_300_bf_scaffold_279_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22458..23774
DNA (1317bp) protein (439aa)
Threonine synthase {ECO:0000313|EMBL:EIL97130.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EIL97130.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rh
Threonine synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCD9_9GAMM
threonine synthase
SCNpilot_expt_300_bf_scaffold_279_22
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24020..25297
DNA (1278bp) protein (426aa)
Capsular polysaccharide biosynthesis protein/UDP-glucose dehydrogenase/GDP mannose family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVW3_9GAMM rbh
Capsular polysaccharide biosynthesis protein/UDP-glucose dehydrogenase/GDP mannose family protein {ECO:0000313|EMBL:EIL91354.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; X
Vi polysaccharide biosynthesis protein VipA/TviB
SCNpilot_expt_300_bf_scaffold_279_23
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25297..26349
DNA (1053bp) protein (351aa)
Vi polysaccharide biosynthesis protein vipB/tviC n=1 Tax=Dyella ginsengisoli RepID=UPI00034C4BA2 rbh
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EIL91353.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
nucleoside-diphosphate-sugar epimerase
SCNpilot_expt_300_bf_scaffold_279_24
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26608..28011
DNA (1404bp) protein (468aa)
Undecaprenyl-phosphate galactosephosphotransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVW0_9GAMM rbh
Undecaprenyl-phosphate galactosephosphotransferase {ECO:0000313|EMBL:EIL91351.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter
sugar transferase
SCNpilot_expt_300_bf_scaffold_279_25
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28067..30949
DNA (2883bp) protein (961aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVV9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91350.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
hypothetical protein
SCNpilot_expt_300_bf_scaffold_279_26
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31026..31751
DNA (726bp) protein (242aa)
N-acetyltransferase GCN5 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVV8_9GAMM rbh
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EIL91349.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
hypothetical protein
SCNpilot_expt_300_bf_scaffold_279_27
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31756..32307
DNA (552bp) protein (184aa)
N-acetyltransferase GCN5 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVV7_9GAMM
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EIL91348.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
N-acetyltransferase GCN5
SCNpilot_expt_300_bf_scaffold_279_28
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32436..33497)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVT2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91323.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
SCNpilot_expt_300_bf_scaffold_279_29
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33665..34588
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B3A1F4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX16314.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
SCNpilot_expt_300_bf_scaffold_279_30
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34595..41737
DNA (7143bp) protein (2381aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003728266 rbh
Thioester reductase {ECO:0000313|EMBL:AIF48395.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
thioester reductase
Displaying items 1-30 of 31 in total

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