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SCNpilot_expt_300_bf_scaffold_1379

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1379_1
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(139..540)
DNA (402bp) protein (134aa)
Integrase catalytic subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W579_9SPHN
Integrase catalytic subunit {ECO:0000313|EMBL:KHS45171.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
integrase catalytic subunit
SCNpilot_expt_300_bf_scaffold_1379_2
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(524..835)
DNA (312bp) protein (104aa)
Transposase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A7G4_DEIPD
transposase
Transposase {ECO:0000313|EMBL:AFZ69756.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DS
SCNpilot_expt_300_bf_scaffold_1379_3
unknown

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comp(942..1088)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1379_4
unknown

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comp(1145..1246)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1379_5
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

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comp(1373..3151)
DNA (1779bp) protein (593aa)
glycosidase (EC:3.2.1.-); K01212 levanase [EC:3.2.1.65] Tax=RBG_13_Planctomycetes_63_9_curated
levanase n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B4407E
2,6-beta-D-fructofuranosidase
SCNpilot_expt_300_bf_scaffold_1379_6
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3212..3775
DNA (564bp) protein (188aa)
Ankyrin n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8E1L9_9BACL
Ankyrin {ECO:0000313|EMBL:EMT53156.1}; TaxID=1300222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
ankyrin-repeat containing protein
SCNpilot_expt_300_bf_scaffold_1379_7
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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3881..4366
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BJH3_9XANT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE85844.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
SCNpilot_expt_300_bf_scaffold_1379_8
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(4363..4716)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R3N0_PIRSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB16984.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (stra
SCNpilot_expt_300_bf_scaffold_1379_9
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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4892..5368
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00036D3673
oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:AIY17000.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter si
SCNpilot_expt_300_bf_scaffold_1379_10
Talaromyces stipitatus, Talaromyces, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

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5465..6358
DNA (894bp) protein (298aa)
G-protein beta WD-40 repeats containing protein, putative n=1 Tax=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) RepID=B8LXS9_TALSN
G-protein beta WD-40 repeats containing protein, putative {ECO:0000313|EMBL:EED22744.1}; TaxID=441959 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae;
WD40 repeat-containing protein
SCNpilot_expt_300_bf_scaffold_1379_11
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6421..8610)
DNA (2190bp) protein (730aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:R
Catalase/hydroperoxidase HPI(I) n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SHH6_9RHIZ rbh
catalase/hydroperoxidase HPI(I)
SCNpilot_expt_300_bf_scaffold_1379_12
unknown

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8730..9068
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1379_13
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

9181..10209
DNA (1029bp) protein (343aa)
6-phosphofructokinase {ECO:0000256|SAAS:SAAS00197180}; EC=2.7.1.11 {ECO:0000256|SAAS:SAAS00197180};; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadacea
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI00035FFDDC
6-phosphofructokinase
SCNpilot_expt_300_bf_scaffold_1379_14
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(10314..10982)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000371E283
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE85845.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
SCNpilot_expt_300_bf_scaffold_1379_15
unknown

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11150..11482
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1379_16
unknown

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11443..11703
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying 16 items

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