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SCNpilot_expt_300_bf_scaffold_491

Search features with annotation key words

Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_491_1
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..469
DNA (468bp) protein (156aa)
Transposase orfB, IS3 family n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DAH7_MYXXD
IS5 family transposase orfB
Transposase orfB, IS3 family {ECO:0000313|EMBL:ABF92987.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="My
SCNpilot_expt_300_bf_scaffold_491_2
unknown

Not on your lists

492..689
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_491_3
unknown

Not on your lists

693..932
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_491_4
unknown

Not on your lists

922..1386
DNA (465bp) protein (155aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_491_5
unknown

Not on your lists

comp(1222..1581)
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_491_6
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

1753..2781
DNA (1029bp) protein (343aa)
Putative LacI-family transcriptional regulator n=1 Tax=Streptomyces sp. PAMC26508 RepID=M9TSP4_9ACTO
Transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AIE86022.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimb
SCNpilot_expt_300_bf_scaffold_491_7
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

2784..3614
DNA (831bp) protein (277aa)
Prepilin-type N-terminal cleavage/methylation domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZA1_9BACT
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AIE86023.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
SCNpilot_expt_300_bf_scaffold_491_8
unknown

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comp(3604..3858)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_491_9

Not on your lists

4153..5019
DNA (867bp) protein (289aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO11110.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_300_bf_scaffold_491_10
unknown

Not on your lists

5190..5417
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_491_11
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(5483..7876)
DNA (2394bp) protein (798aa)
Glycoside hydrolase, family 3-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIZ8_KORVE rbh
glycoside hydrolase family protein
Glycoside hydrolase family protein {ECO:0000313|EMBL:AIE85047.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriim
SCNpilot_expt_300_bf_scaffold_491_12
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7970..9307)
DNA (1338bp) protein (446aa)
Putative uncharacterized protein id=3829795 bin=GWF2_Bacteroidetes_43_11 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
hypothetical protein Tax=GWF2_Bacteroidetes_43_11_curated
peptide-N-glycosidase
SCNpilot_expt_300_bf_scaffold_491_13
unknown

Not on your lists

comp(9438..10370)
DNA (933bp) protein (311aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_491_14
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(10477..14367)
DNA (3891bp) protein (1297aa)
beta-galactosidase, partial n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B73031 rbh
beta-galactosidase Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
beta-galactosidase
SCNpilot_expt_300_bf_scaffold_491_15
unknown

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comp(14423..15259)
DNA (837bp) protein (279aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_491_16
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(15310..16977)
DNA (1668bp) protein (556aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000377A7C2 rbh
Amidase
Amidase {ECO:0000313|EMBL:AIE86341.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348
SCNpilot_expt_300_bf_scaffold_491_17
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(17107..17712)
DNA (606bp) protein (202aa)
Nitroreductase n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PM73_MEIRD
nitroreductase
Strain A contig00062, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ54046.1}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiotherm
SCNpilot_expt_300_bf_scaffold_491_18
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17880..18389
DNA (510bp) protein (170aa)
Lipoprotein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X593_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC19810.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.
SCNpilot_expt_300_bf_scaffold_491_19
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

18455..19429
DNA (975bp) protein (325aa)
1-aminocyclopropane-1-carboxylate deaminase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0B9_THERP
pyridoxal-phosphate dependent enzyme
Pyridoxal-phosphate dependent enzyme {ECO:0000313|EMBL:AIE87415.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbri
SCNpilot_expt_300_bf_scaffold_491_20
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(19420..21978)
DNA (2559bp) protein (853aa)
Phosphoesterase family protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLV0_SINAD rbh
Phosphoesterase family protein
Phosphoesterase family protein {ECO:0000313|EMBL:AGA30227.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulispha
SCNpilot_expt_300_bf_scaffold_491_21
unknown

Not on your lists

22028..22738
DNA (711bp) protein (237aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_491_22
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22803..23657
DNA (855bp) protein (285aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Paenibacillus alvei TS-15 RepID=S9TPC2_PAEAL
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EPY04156.1}; TaxID=1117108 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibac
endonuclease/exonuclease/phosphatase
SCNpilot_expt_300_bf_scaffold_491_23
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

23762..24568
DNA (807bp) protein (269aa)
Prepilin-type N-terminal cleavage/methylation domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EX71_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE86485.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
SCNpilot_expt_300_bf_scaffold_491_24
unknown

Not on your lists

comp(24784..25170)
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_491_25
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25124..25525)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7R3_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38273.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
SCNpilot_expt_300_bf_scaffold_491_26
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(25526..26995)
DNA (1470bp) protein (490aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SEV7_9BACT
putative cytosolic protein
Putative cytosolic protein {ECO:0000313|EMBL:AIE84948.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas gin
SCNpilot_expt_300_bf_scaffold_491_27
unknown

Not on your lists

27140..27820
DNA (681bp) protein (227aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_491_28
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(27807..28979)
DNA (1173bp) protein (391aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
aroG; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G660_SORC5
SCNpilot_expt_300_bf_scaffold_491_29
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(29000..30145)
DNA (1146bp) protein (382aa)
Cytochrome C family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWD3_9BACT
Tetratricopeptide TPR_2 repeat-containing protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
protein kinase
SCNpilot_expt_300_bf_scaffold_491_30
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(30231..31121)
DNA (891bp) protein (297aa)
Tax=CG_Arma_01
Displaying 30 items

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