ggKbase home page

SCNpilot_expt_300_bf_scaffold_930

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_930_1
unknown

Not on your lists

2..121
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_930_2
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

239..952
DNA (714bp) protein (238aa)
Peptidase of plants and bacteria n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ETD4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE85747.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
SCNpilot_expt_300_bf_scaffold_930_3
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(986..1876)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJS9_9BACT
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AIE84908.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengis
SCNpilot_expt_300_bf_scaffold_930_4
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(1876..4128)
DNA (2253bp) protein (751aa)
Glycoside hydrolase family 2, sugar binding n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5URZ7_ROSS1
glycoside hydrolase family protein rbh
Glycoside hydrolase family protein {ECO:0000313|EMBL:AIE85725.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriim
SCNpilot_expt_300_bf_scaffold_930_5
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

4393..5448
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) RepID=A7EXQ2_SCLS1
G-protein beta WD-40 repeats containing protein, putative
G-protein beta WD-40 repeats containing protein, putative {ECO:0000313|EMBL:AIE85726.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimo
SCNpilot_expt_300_bf_scaffold_930_6
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5445..7961)
DNA (2517bp) protein (839aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Geobacter sp. (strain M21) RepID=C6E2J0_GEOSM rbh
PAS/PAC sensor hybrid histidine kinase
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ACT17136.1}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geob
SCNpilot_expt_300_bf_scaffold_930_7
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8109..8780
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QIN0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX56333.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
SCNpilot_expt_300_bf_scaffold_930_8
unknown

Not on your lists

8995..9357
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_930_9
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

9389..11485
DNA (2097bp) protein (699aa)
NADH-quinone oxidoreductase, chain G n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EYP7_9BACT rbh
NADH-quinone oxidoreductase subunit G
NADH-quinone oxidoreductase subunit G {ECO:0000313|EMBL:AIE84441.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbr
SCNpilot_expt_300_bf_scaffold_930_10
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists


comp(11895..12290)
DNA (396bp) protein (132aa)
50S ribosomal protein L7/L12 n=1 Tax=Hydrogenobaculum sp. (strain Y04AAS1) RepID=RL7_HYDS0
ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimon
SCNpilot_expt_300_bf_scaffold_930_11
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists


comp(12329..13003)
DNA (675bp) protein (225aa)
50S ribosomal protein L10 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FET0_CONWI
50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000313|EMBL:AIE87422.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas gins
SCNpilot_expt_300_bf_scaffold_930_12
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

13271..13726
DNA (456bp) protein (152aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EYP3_9BACT
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCW35574.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" so
SCNpilot_expt_300_bf_scaffold_930_13
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

13716..13985
DNA (270bp) protein (90aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EYP3_9BACT
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCW35574.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" so
SCNpilot_expt_300_bf_scaffold_930_14

Not on your lists

14004..15170
DNA (1167bp) protein (389aa)
Marine sediment metagenome DNA, contig: S01H1_S03351 {ECO:0000313|EMBL:GAF90997.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
SCNpilot_expt_300_bf_scaffold_930_15
unknown

Not on your lists

15218..16441
DNA (1224bp) protein (408aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_930_16
unknown

Not on your lists

comp(16438..16911)
DNA (474bp) protein (158aa)
hypothetical protein
SCNpilot_expt_300_bf_scaffold_930_17
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

17125..18150
DNA (1026bp) protein (342aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ETJ9_9BACT
3-isopropylmalate dehydrogenase
SCNpilot_expt_300_bf_scaffold_930_18
Paenibacillus sp. HGF5, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18392..18982)
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus sp. HGF5 RepID=F3M3Z8_9BACL
Putative uncharacterized protein {ECO:0000313|EMBL:EGG38003.1}; TaxID=908341 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF5.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_930_19
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19281..20591
DNA (1311bp) protein (437aa)
Glycerol-3-phosphate transporter n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CDQ9_9PLAN rbh
Glycerol-3-phosphate transporter {ECO:0000313|EMBL:EDL57146.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DS
major facilitator superfamily protein
SCNpilot_expt_300_bf_scaffold_930_20
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

20600..21457
DNA (858bp) protein (286aa)
metallophosphoesterase Tax=RBG_13_Chloroflexi_66_10_curated
Ser/Thr protein phosphatase family protein id=2983797 bin=GWF2_Planctomycete_41_51 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Ser/Thr protein phosphatase family protein
SCNpilot_expt_300_bf_scaffold_930_21
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21583..22767
DNA (1185bp) protein (395aa)
FAD dependent oxidoreductase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y8A3_9SPHI rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EHQ24922.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacte
FAD dependent oxidoreductase TIGR03364
SCNpilot_expt_300_bf_scaffold_930_22
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22764..23438
DNA (675bp) protein (225aa)
Putative phosphonatase-like hydrolase n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VK11_9SPHI
Putative phosphonatase-like hydrolase {ECO:0000313|EMBL:EFK58613.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" sourc
HAD superfamily hydrolase
SCNpilot_expt_300_bf_scaffold_930_23
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

23465..24190
DNA (726bp) protein (242aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLB1_ROSCS
xylose isomerase
Xylose isomerase {ECO:0000313|EMBL:AIE87298.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli
SCNpilot_expt_300_bf_scaffold_930_24
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

24481..24744
DNA (264bp) protein (88aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE83567.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
SCNpilot_expt_300_bf_scaffold_930_25
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(24819..25112)
DNA (294bp) protein (98aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE83566.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
SCNpilot_expt_300_bf_scaffold_930_26
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25287..26081
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WVV1_KYRT2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG07644.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBR
SCNpilot_expt_300_bf_scaffold_930_27
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26084..28366)
DNA (2283bp) protein (761aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQ99_9SPHI rbh
peptide-binding protein
Peptide-binding protein {ECO:0000313|EMBL:AHF15872.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
SCNpilot_expt_300_bf_scaffold_930_28
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(28407..29240)
DNA (834bp) protein (278aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE84534.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
Displaying 28 items

View Taxonomy