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SCNpilot_expt_300_bf_scaffold_1633

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1633_1
Xenopus (Silurana) tropicalis, Xenopus, Anura, Amphibia, Chordata, Metazoa

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comp(3..236)
DNA (234bp) protein (78aa)
LOC100170584 protein (Fragment) n=2 Tax=Xenopus tropicalis RepID=B3DM02_XENTR
LOC100170584 protein {ECO:0000313|EMBL:AAI67648.1}; Flags: Fragment;; TaxID=8364 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipida
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1633_2
Arion vulgaris, Arion, Gastropoda, Mollusca, Metazoa

Not on your lists

comp(339..1928)
DNA (1590bp) protein (530aa)
Uncharacterized protein (Fragment) n=1 Tax=Ciona savignyi RepID=H2ZI82_CIOSA rbh
Uncharacterized protein {ECO:0000313|EMBL:CEK86384.1}; Flags: Fragment;; TaxID=1028688 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Panpulmonata; Eupu
dynein heavy chain 2, axonemal-like rbh
SCNpilot_expt_300_bf_scaffold_1633_3
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

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comp(2371..2607)
DNA (237bp) protein (79aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3ZEM2_BRAFL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEN49178.1}; Flags: Fragment;; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchio
SCNpilot_expt_300_bf_scaffold_1633_4
Pteropus alecto, Pteropus, Chiroptera, Mammalia, Chordata, Metazoa

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comp(2683..3030)
DNA (348bp) protein (116aa)
PREDICTED: dynein heavy chain 2, axonemal-like, partial n=1 Tax=Sus scrofa RepID=UPI00022CEEFD
dynein heavy chain 2, axonemal-like
Dynein heavy chain 2, axonemal {ECO:0000313|EMBL:ELK03831.1}; TaxID=9402 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Mega
SCNpilot_expt_300_bf_scaffold_1633_5
Ichthyophthirius multifiliis, Ichthyophthirius, Hymenostomatida, Oligohymenophorea, Eukaryota

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comp(3150..3386)
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Ichthyophthirius multifiliis (strain G5) RepID=G0QX85_ICHMG
Putative uncharacterized protein {ECO:0000313|EMBL:EGR30170.1}; TaxID=857967 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Ophryoglenina; Ichthyoph
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1633_6
Oikopleura dioica, Oikopleura, Appendicularia, Chordata, Metazoa

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comp(3331..3624)
DNA (294bp) protein (98aa)
Whole genome shotgun assembly, reference scaffold set, scaffold scaffold_16 n=1 Tax=Oikopleura dioica RepID=E4X9G4_OIKDI
Whole genome shotgun assembly, reference scaffold set, scaffold scaffold_16 {ECO:0000313|EMBL:CBY19093.1}; TaxID=34765 species="Eukaryota; Metazoa; Chordata; Tunicata; Appendicularia; Oikopleuridae; O
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1633_7
Tripneustes gratilla, Tripneustes, Temnopleuroida, Euechinoidea, Echinodermata, Metazoa

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comp(3753..4013)
DNA (261bp) protein (87aa)
Dynein heavy chain isotype 5C {ECO:0000313|EMBL:AAA63590.1}; EC=3.6.1.3 {ECO:0000313|EMBL:AAA63590.1};; Flags: Fragment;; TaxID=7673 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa
Dynein heavy chain isotype 5C (Fragment) n=1 Tax=Tripneustes gratilla RepID=Q27809_TRIGR
similar to predicted protein
SCNpilot_expt_300_bf_scaffold_1633_8
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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comp(4041..4229)
DNA (189bp) protein (63aa)
Dynein heavy chain 2, axonemal n=1 Tax=Crassostrea gigas RepID=K1QU75_CRAGI
similar to predicted protein
Dynein heavy chain 2, axonemal {ECO:0000313|EMBL:EKC37208.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.
SCNpilot_expt_300_bf_scaffold_1633_9
Xenopus (Silurana) tropicalis, Xenopus, Anura, Amphibia, Chordata, Metazoa

Not on your lists

comp(4265..4513)
DNA (249bp) protein (83aa)
Uncharacterized protein (Fragment) n=1 Tax=Xenopus tropicalis RepID=F7DZ97_XENTR
Uncharacterized protein {ECO:0000313|Ensembl:ENSXETP00000018197}; Flags: Fragment;; TaxID=8364 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pi
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1633_10
unknown

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comp(4605..4733)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1633_11
Ciona savignyi, Ciona, Enterogona, Ascidiacea, Chordata, Metazoa

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comp(4774..4977)
DNA (204bp) protein (68aa)
Uncharacterized protein (Fragment) n=1 Tax=Ciona savignyi RepID=H2ZI81_CIOSA
Uncharacterized protein {ECO:0000313|Ensembl:ENSCSAVP00000017297}; TaxID=51511 species="Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona.;" source="Ciona
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1633_12
Helobdella robusta, Helobdella, Rhynchobdellida, Hirudinea, Annelida, Metazoa

Not on your lists

comp(5049..5435)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Helobdella robusta RepID=T1FZ01_HELRO
Uncharacterized protein {ECO:0000313|EMBL:ESN99369.1, ECO:0000313|EnsemblMetazoa:HelroP67352}; TaxID=6412 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Clitellata; Hirudinida; Hirudinea; Rhyn
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1633_13
Arion vulgaris, Arion, Gastropoda, Mollusca, Metazoa

Not on your lists

comp(5463..5813)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7TTV6_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:CEK86378.1}; Flags: Fragment;; TaxID=1028688 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Panpulmonata; Eupu
hypothetical protein ; K10408 dynein heavy chain, axonemal
SCNpilot_expt_300_bf_scaffold_1633_14
Tripneustes gratilla, Tripneustes, Temnopleuroida, Euechinoidea, Echinodermata, Metazoa

Not on your lists

comp(6178..6396)
DNA (219bp) protein (73aa)
Dynein heavy chain isotype 5C {ECO:0000313|EMBL:AAA63590.1}; EC=3.6.1.3 {ECO:0000313|EMBL:AAA63590.1};; Flags: Fragment;; TaxID=7673 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa
Dynein heavy chain isotype 5C (Fragment) n=1 Tax=Tripneustes gratilla RepID=Q27809_TRIGR
hypothetical protein ; K10408 dynein heavy chain, axonemal
SCNpilot_expt_300_bf_scaffold_1633_15
Tripneustes gratilla, Tripneustes, Temnopleuroida, Euechinoidea, Echinodermata, Metazoa

Not on your lists

comp(6620..6841)
DNA (222bp) protein (74aa)
Dynein heavy chain isotype 5C {ECO:0000313|EMBL:AAA63590.1}; EC=3.6.1.3 {ECO:0000313|EMBL:AAA63590.1};; Flags: Fragment;; TaxID=7673 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa
Dynein heavy chain isotype 5C (Fragment) n=1 Tax=Tripneustes gratilla RepID=Q27809_TRIGR
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1633_16
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(6965..7228)
DNA (264bp) protein (88aa)
UPI0003D08161 related cluster n=1 Tax=unknown RepID=UPI0003D08161
Dynein heavy chain 2, axonemal {ECO:0000313|EMBL:EKC37209.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.
Dnahc2, 2900022L05Rik, 4930564A01, D130094J20, D330014H01Rik, Dnah2, Dnhd3; dynein, axonemal, heavy chain 2; K10408 dynein heavy chain, axonemal
SCNpilot_expt_300_bf_scaffold_1633_17
Myotis davidii, Myotis, Chiroptera, Mammalia, Chordata, Metazoa

Not on your lists

comp(7240..7506)
DNA (267bp) protein (89aa)
Dynein heavy chain 2, axonemal n=1 Tax=Myotis davidii RepID=L5LZF5_MYODS
Dynein heavy chain 2, axonemal {ECO:0000313|EMBL:ELK31814.1}; TaxID=225400 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Mi
DNAH2; dynein, axonemal, heavy chain 2
SCNpilot_expt_300_bf_scaffold_1633_18
Strigamia maritima, Strigamia, Geophilomorpha, Pleurostigmophora, Arthropoda, Metazoa

Not on your lists

comp(7534..8187)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Strigamia maritima RepID=T1INB1_STRMM
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SMAR002488-PA}; TaxID=126957 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Myriapoda; Chilopoda; Pleurostigmophora; Geophilomorpha; Linotaenii
dynein heavy chain 2, axonemal-like; K10408 dynein heavy chain, axonemal
Displaying 18 items

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