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SCNpilot_expt_300_bf_scaffold_2283

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_2283_1
Callorhinchus milii, Callorhinchus, Chimaeriformes, Holocephali, Chordata, Metazoa

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2..220
DNA (219bp) protein (73aa)
Putative cation-transporting ATPase 13A1 n=1 Tax=Crassostrea gigas RepID=K1QTP6_CRAGI
Putative cation-transporting ATPase 13A1-like protein {ECO:0000313|EMBL:AFP08557.1}; TaxID=7868 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes
similar to ATPase type 13A
SCNpilot_expt_300_bf_scaffold_2283_2
unknown

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198..479
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2283_3
unknown

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727..1059
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2283_4
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

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1725..1985
DNA (261bp) protein (87aa)
Predicted protein {ECO:0000313|EMBL:EDO39943.1}; Flags: Fragment;; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematost
SCNpilot_expt_300_bf_scaffold_2283_5
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

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2715..3095
DNA (381bp) protein (127aa)
Countin-like protein n=1 Tax=Philodina roseola RepID=B3G4N8_PHIRO
Countin-like protein {ECO:0000313|EMBL:ACD54786.1}; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Ro
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2283_6
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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3415..3594
DNA (180bp) protein (60aa)
Countin-1 n=1 Tax=Crassostrea gigas RepID=K1R157_CRAGI
Countin-1 {ECO:0000313|EMBL:EKC43032.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostre
SCNpilot_expt_300_bf_scaffold_2283_7
Dictyostelium fasciculatum, Dictyostelium, Dictyosteliida, Eukaryota

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3795..4154
DNA (360bp) protein (120aa)
Pleckstrin domain-containing protein n=1 Tax=Dictyostelium fasciculatum (strain SH3) RepID=F4PZZ1_DICFS
pleckstrin domain-containing protein
Pleckstrin domain-containing protein {ECO:0000313|EMBL:EGG18905.1}; TaxID=1054147 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium fasciculatum (strain
SCNpilot_expt_300_bf_scaffold_2283_8
unknown

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4303..4449
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2283_9
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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5028..5450
DNA (423bp) protein (141aa)
Countin-1 n=1 Tax=Crassostrea gigas RepID=K1R157_CRAGI
Countin-1 {ECO:0000313|EMBL:EKC43032.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostre
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2283_10
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

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5438..5770
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3XZH8_BRAFL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEN66499.1}; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Fl
SCNpilot_expt_300_bf_scaffold_2283_11
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5944..6468)
DNA (525bp) protein (175aa)
Peptidase M13 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y074_9SPHI
Peptidase M13 {ECO:0000313|EMBL:EHQ27983.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mu
putative metalloendopeptidase
SCNpilot_expt_300_bf_scaffold_2283_12
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6547..7257)
DNA (711bp) protein (237aa)
Putative metalloendopeptidase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KNW7_SOLCM
putative metalloendopeptidase
Putative metalloendopeptidase {ECO:0000313|EMBL:AFD05378.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" s
SCNpilot_expt_300_bf_scaffold_2283_13
unknown

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7302..7547
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2283_14
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7572..8384)
DNA (813bp) protein (271aa)
Endothelin-converting enzyme 1 (EC:3.4.24.71)
peptidase M13 n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003487119
Contig121, whole genome shotgun sequence {ECO:0000313|EMBL:KIO74960.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source=
Displaying 14 items

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