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SCNpilot_expt_300_bf_scaffold_3529

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_3529_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..346
DNA (345bp) protein (115aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; S
isocitrate dehydrogenase (EC:1.1.1.41)
isocitrate dehydrogenase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B2EE84
SCNpilot_expt_300_bf_scaffold_3529_2
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(406..1551)
DNA (1146bp) protein (382aa)
monooxygenase n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A88ECA rbh
hypothetical protein
Monooxygenase, FAD-binding {ECO:0000313|EMBL:ABQ66824.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" s
SCNpilot_expt_300_bf_scaffold_3529_3
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1598..3337
DNA (1740bp) protein (580aa)
Sodium/hydrogen exchanger family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVM2_9SPHN rbh
DNA, contig: SP612 {ECO:0000313|EMBL:GAN12643.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
sodium:proton exchanger
SCNpilot_expt_300_bf_scaffold_3529_4
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3371..4510
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003807C03 rbh
Glycosyl transferase family 1 {ECO:0000313|EMBL:KHA64743.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo
glycosyl transferase family 1
SCNpilot_expt_300_bf_scaffold_3529_5
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4507..4716)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WT05_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP56764.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
SCNpilot_expt_300_bf_scaffold_3529_6
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4794..5249)
DNA (456bp) protein (152aa)
Transcriptional regulator PadR-like family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WT06_9SPHN
DNA, contig: SP614 {ECO:0000313|EMBL:GAN12951.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
PadR-like family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_3529_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5473..6468
DNA (996bp) protein (332aa)
ATPase associated with various cellular activities family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WT07_9SPHN
DNA, contig: SP614 {ECO:0000313|EMBL:GAN12950.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
ATPase AAA
SCNpilot_expt_300_bf_scaffold_3529_8
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6465..6737
DNA (273bp) protein (91aa)
ATPase AAA n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000363F053
ATPase AAA {ECO:0000313|EMBL:EQA97728.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
AAA ATPase
SCNpilot_expt_300_bf_scaffold_3529_9
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7056..8015
DNA (960bp) protein (320aa)
beta-lactamase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6BA5C rbh
DNA, contig: SP669 {ECO:0000313|EMBL:GAN15851.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
putative hydrolase
SCNpilot_expt_300_bf_scaffold_3529_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8012..8353
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UX83_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82864.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
SCNpilot_expt_300_bf_scaffold_3529_11
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8421..9197
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5E4C4 rbh
DNA, contig: SP614 {ECO:0000313|EMBL:GAN12949.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
SCNpilot_expt_300_bf_scaffold_3529_12
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9490..9963
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003664DF4
DNA, contig: SP614 {ECO:0000313|EMBL:GAN12948.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
endonuclease
SCNpilot_expt_300_bf_scaffold_3529_13
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10088..12130
DNA (2043bp) protein (681aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035D1EC3 rbh
Patatin {ECO:0000313|EMBL:KHA64721.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
patatin
Displaying 13 items

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