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SCNpilot_expt_300_bf_scaffold_1323

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1323_1
unknown

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2..550
DNA (549bp) protein (183aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1323_2
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1170..2306
DNA (1137bp) protein (379aa)
Putative epoxide hydrolase (EC:3.3.2.10)
epoxide hydrolase n=1 Tax=Nevskia ramosa RepID=UPI0003B410BD
hydrolase Tax=GWA2_Rhodocyclales_65_20_curated
SCNpilot_expt_300_bf_scaffold_1323_3
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2371..3648
DNA (1278bp) protein (426aa)
protein-S-isoprenylcysteine methyltransferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA0C0 rbh
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11973.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
protein-S-isoprenylcysteine methyltransferase
SCNpilot_expt_300_bf_scaffold_1323_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3768..5141)
DNA (1374bp) protein (458aa)
glutamate--cysteine ligase n=1 Tax=Sphingomonas melonis RepID=UPI00036C8444 rbh
glutamate--cysteine ligase rbh
Glutamate--cysteine ligase {ECO:0000313|EMBL:AIT05586.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomona
SCNpilot_expt_300_bf_scaffold_1323_5
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5800..6474)
DNA (675bp) protein (225aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sp
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Sphingomonas sp. S17 RepID=F3WZC0_9SPHN
16S rRNA methyltransferase
SCNpilot_expt_300_bf_scaffold_1323_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6471..6683)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3B98D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT07960.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas t
SCNpilot_expt_300_bf_scaffold_1323_7
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6629..7036)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003682436
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ66923.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sour
SCNpilot_expt_300_bf_scaffold_1323_8
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7133..8047
DNA (915bp) protein (305aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00188627}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00188633};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonad
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B38974 rbh
4-hydroxybenzoate polyprenyltransferase
SCNpilot_expt_300_bf_scaffold_1323_9
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8048..8539)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IQS6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EAT07783.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1323_10
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8749..9531
DNA (783bp) protein (261aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomo
succinate dehydrogenase iron-sulfur subunit n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000365D16D rbh
succinate dehydrogenase
SCNpilot_expt_300_bf_scaffold_1323_11
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9551..9952
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036D24DD
Uncharacterized protein {ECO:0000313|EMBL:GAO40899.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
phenylacetic acid degradation protein
SCNpilot_expt_300_bf_scaffold_1323_12
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9981..11075
DNA (1095bp) protein (365aa)
AFG1 family ATPase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037CA038 rbh
Sphingomonas taxi strain 30a NODE_40, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30384.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
ATPase rbh
SCNpilot_expt_300_bf_scaffold_1323_13
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11106..11858
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SZN3_CAUSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ70523.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (s
SCNpilot_expt_300_bf_scaffold_1323_14
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11990..12952
DNA (963bp) protein (321aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=1219049 species="Bacteria; P
malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase n=1 Tax=Sphingomonas sp. S17 RepID=F3X3J7_9SPHN rbh
SCNpilot_expt_300_bf_scaffold_1323_15
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13035..13925
DNA (891bp) protein (297aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphi
succinyl-CoA synthetase subsunit alpha n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4C033 rbh
succinate--CoA ligase rbh
SCNpilot_expt_300_bf_scaffold_1323_16
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14000..16636
DNA (2637bp) protein (879aa)
2-oxoglutarate dehydrogenase {ECO:0000313|EMBL:AIT05623.1}; EC=1.2.4.2 {ECO:0000313|EMBL:AIT05623.1};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomo
sucA; 2-oxoglutarate dehydrogenase (EC:1.2.4.2)
MFS transporter n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B7620F
Displaying 16 items

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