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SCNpilot_expt_300_bf_scaffold_1552

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1552_1
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..421
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000381F405
Dehydrogenase {ECO:0000313|EMBL:EQB07924.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum
putative glucose/sorbosone dehydrogenase
SCNpilot_expt_300_bf_scaffold_1552_2
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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778..1905
DNA (1128bp) protein (376aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
aminomethyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3933C rbh
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1552_3
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1907..2278
DNA (372bp) protein (124aa)
Glycine cleavage system H protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X247_9SPHN
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
glycine cleavage system protein H
SCNpilot_expt_300_bf_scaffold_1552_4
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2286..3053
DNA (768bp) protein (256aa)
Methyltransferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0M5_9SPHN rbh
methyltransferase
Methyltransferase {ECO:0000313|EMBL:AGH47999.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1
SCNpilot_expt_300_bf_scaffold_1552_5
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3053..4411
DNA (1359bp) protein (453aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796}
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Sphingomonas sp. S17 RepID=F3X249_9SPHN rbh
glycine dehydrogenase
SCNpilot_expt_300_bf_scaffold_1552_6
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4408..5982
DNA (1575bp) protein (525aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sph
glycine dehydrogenase (EC:1.4.4.2)
Glycine dehydrogenase [decarboxylating] (Glycine cleavage system P2 protein) n=1 Tax=Sphingomonas sp. S17 RepID=F3X250_9SPHN rbh
SCNpilot_expt_300_bf_scaffold_1552_7
Hyphomonadaceae bacterium BRH_c29, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6094..6915
DNA (822bp) protein (274aa)
fabK; trans-2-enoyl-ACP reductase II (EC:1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase n=1 Tax=alpha proteobacterium JLT2015 RepID=M2SEU4_9PROT rbh
2-nitropropane dioxygenase {ECO:0000313|EMBL:KJS24603.1}; TaxID=1629720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae.;" source="Hyphomonadaceae bacterium BR
SCNpilot_expt_300_bf_scaffold_1552_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6932..9001)
DNA (2070bp) protein (690aa)
nadE; NAD synthetase (EC:6.3.5.1) rbh
NadE protein {ECO:0000313|EMBL:KIU28606.1}; EC=6.3.5.1 {ECO:0000313|EMBL:KIU28606.1};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphing
NAD synthetase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3CAD0 rbh
SCNpilot_expt_300_bf_scaffold_1552_9
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9058..11931
DNA (2874bp) protein (958aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037E4A1E rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ85702.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis s
SCNpilot_expt_300_bf_scaffold_1552_10
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11942..12286)
DNA (345bp) protein (115aa)
Alkaline phosphatase {ECO:0000256|PIRNR:PIRNR031924}; EC=3.1.3.1 {ECO:0000256|PIRNR:PIRNR031924};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000381161B
alkaline phosphatase
SCNpilot_expt_300_bf_scaffold_1552_11
unknown

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12698..12940
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1552_12
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12864..13253)
DNA (390bp) protein (130aa)
Alkaline phosphatase {ECO:0000256|PIRNR:PIRNR031924}; EC=3.1.3.1 {ECO:0000256|PIRNR:PIRNR031924};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000381161B
alkaline phosphatase
SCNpilot_expt_300_bf_scaffold_1552_13
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13567..15495
DNA (1929bp) protein (643aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037E28C6 rbh
DNA, contig: SP610 {ECO:0000313|EMBL:GAN12428.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
thiol:disulfide interchange protein
SCNpilot_expt_300_bf_scaffold_1552_14
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15492..16244)
DNA (753bp) protein (251aa)
arginyl-tRNA-protein transferase (EC:2.3.2.8)
arginyl-tRNA-protein transferase n=1 Tax=Sphingomonas melonis RepID=UPI00036A080D rbh
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:00002
SCNpilot_expt_300_bf_scaffold_1552_15
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16390..17310)
DNA (921bp) protein (307aa)
threonine dehydratase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003700E2F
DNA, contig: SP610 {ECO:0000313|EMBL:GAN12433.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
threonine dehydratase
SCNpilot_expt_300_bf_scaffold_1552_16
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17286..17579)
DNA (294bp) protein (98aa)
Threonine dehydratase {ECO:0000313|EMBL:EZP53516.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EZP53516.1};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace
Threonine dehydratase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S7K2_9SPHN
threonine dehydratase
SCNpilot_expt_300_bf_scaffold_1552_17
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17664..18017
DNA (354bp) protein (118aa)
Putative oxidoreductase (EC:1.1.-.-)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035F5209
Oxidoreductase {ECO:0000313|EMBL:KHA64168.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;
Displaying 17 items

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