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SCNpilot_expt_300_bf_scaffold_1561

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1561_1
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..129)
DNA (129bp) protein (43aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SH85_9SPHN
3,4-dihydroxy-2-butanone 4-phosphate synthase
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:AGH49942.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" s
SCNpilot_expt_300_bf_scaffold_1561_2
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(206..1282)
DNA (1077bp) protein (359aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IDC8_9SPHN rbh
1,2-oxophytodienoate reductase {ECO:0000313|EMBL:KEO86251.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythr
NADH:flavin oxidoreductase
SCNpilot_expt_300_bf_scaffold_1561_3

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comp(1326..2405)
DNA (1080bp) protein (360aa)
Rieske (2Fe-2S) domain-containing protein n=1 Tax=uncultured bacterium pDL136 RepID=I6N3G9_9BACT rbh
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:AEO37503.1}; TaxID=1071409 species="Bacteria; environmental samples.;" source="uncultured bacterium pDL136.;"
Rieske (2Fe-2S) domain-containing protein
SCNpilot_expt_300_bf_scaffold_1561_4

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comp(2535..3035)
DNA (501bp) protein (167aa)
Transcriptional regulatory protein n=1 Tax=uncultured bacterium pDL136 RepID=I6N3G8_9BACT
Transcriptional regulatory protein {ECO:0000313|EMBL:AEO37502.1}; TaxID=1071409 species="Bacteria; environmental samples.;" source="uncultured bacterium pDL136.;"
AsnC family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_1561_5
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3032..3511)
DNA (480bp) protein (160aa)
Putative AsnC family transcriptional regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZVW8_9SPHN
Putative AsnC family transcriptional regulator {ECO:0000313|EMBL:GAD49519.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium
AsnC family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_1561_6
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3707..5032)
DNA (1326bp) protein (442aa)
Major facilitator family transporter n=1 Tax=uncultured bacterium pDL136 RepID=I6N3G1_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KEO86245.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
major facilitator transporter
SCNpilot_expt_300_bf_scaffold_1561_7
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4978..5736)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IP46_9SPHN rbh
Oxidoreductase {ECO:0000313|EMBL:KEO86244.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL47
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_300_bf_scaffold_1561_8
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5807..6055)
DNA (249bp) protein (83aa)
TonB-dependent receptor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEY5_NOVAD
TonB-dependent receptor {ECO:0000313|EMBL:KHS45061.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
TonB-dependent receptor
Displaying 8 items

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