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SCNpilot_expt_300_bf_scaffold_2216

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_2216_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..323)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003795D1C
DNA, contig: SP614 {ECO:0000313|EMBL:GAN13193.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
peptidase S10 family protein
SCNpilot_expt_300_bf_scaffold_2216_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(431..2491)
DNA (2061bp) protein (687aa)
GTP pyrophosphokinase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B48F35 rbh
Sphingomonas taxi strain 30a NODE_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26533.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
GTP pyrophosphokinase
SCNpilot_expt_300_bf_scaffold_2216_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2598..2948)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037D7954
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP73073.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_expt_300_bf_scaffold_2216_4
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3080..3565
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000369A5E2
Transcriptional regulator {ECO:0000313|EMBL:KHA63604.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
transcriptional regulator
SCNpilot_expt_300_bf_scaffold_2216_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3592..4581)
DNA (990bp) protein (330aa)
flavonol synthase n=2 Tax=Sphingomonas melonis RepID=UPI0003814720 rbh
flavonol synthase
Flavonol synthase {ECO:0000313|EMBL:AIT06371.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_expt_300_bf_scaffold_2216_6
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4653..5825
DNA (1173bp) protein (391aa)
Drug resistance transporter, Bcr/CflA subfamily protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WTM8_9SPHN rbh
DNA, contig: SP617 {ECO:0000313|EMBL:GAN13316.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
major facilitator transporter
SCNpilot_expt_300_bf_scaffold_2216_7
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5894..6112
DNA (219bp) protein (73aa)
hypothetical protein SMAC_11607, partial n=1 Tax=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) RepID=UPI0001BF71E3
Primase {ECO:0000313|EMBL:KHA63800.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
primase
SCNpilot_expt_300_bf_scaffold_2216_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6137..7423)
DNA (1287bp) protein (429aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomo
homoserine dehydrogenase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B754C6
homoserine dehydrogenase
SCNpilot_expt_300_bf_scaffold_2216_9
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7631..7873)
DNA (243bp) protein (81aa)
Uncharacterised protein {ECO:0000313|EMBL:CRE09678.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
SCNpilot_expt_300_bf_scaffold_2216_10
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(7934..8686)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G6L2_CHLAD
Uncharacterised protein {ECO:0000313|EMBL:CRH77205.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2216_11
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8771..9172)
DNA (402bp) protein (134aa)
Uncharacterised protein {ECO:0000313|EMBL:CRD84087.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
SCNpilot_expt_300_bf_scaffold_2216_12
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9399..10508)
DNA (1110bp) protein (370aa)
glycosidase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003748F6D
Uncharacterized protein {ECO:0000313|EMBL:EZP54853.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
glycosidase
SCNpilot_expt_300_bf_scaffold_2216_13
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10447..12522)
DNA (2076bp) protein (692aa)
glycosyl transferase family 1 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B449D8
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EZP54852.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" s
glycosyl transferase family 1
Displaying 13 items

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