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SCNpilot_expt_300_bf_scaffold_590

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_590_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..914
DNA (912bp) protein (304aa)
ribonuclease Z n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC0C0
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:GAO56246.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
metallo-beta-lactamase family protein
SCNpilot_expt_300_bf_scaffold_590_2
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(911..1321)
DNA (411bp) protein (137aa)
Transcriptional regulator, MarR family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VB38_SPHWW
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABQ69504.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
SCNpilot_expt_300_bf_scaffold_590_3
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1403..3181
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S9S5_9SPHN rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH51698.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
SCNpilot_expt_300_bf_scaffold_590_4
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3178..3537
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VB45_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ69511.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wi
SCNpilot_expt_300_bf_scaffold_590_5
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3594..6524)
DNA (2931bp) protein (977aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020Z9_SOLUE rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE55441.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
SCNpilot_expt_300_bf_scaffold_590_6
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6926..8674)
DNA (1749bp) protein (583aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPW0_9SPHN rbh
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AJA06983.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribe
SCNpilot_expt_300_bf_scaffold_590_7
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8830..9366
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7DG52_PSEFL
Uncharacterized protein {ECO:0000313|EMBL:ERP39921.1}; TaxID=1221522 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
hypothetical protein
SCNpilot_expt_300_bf_scaffold_590_8
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9363..10598
DNA (1236bp) protein (412aa)
Diguanylate cyclase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X4E3_9BURK
DeoR faimly transcriptional regulator
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:AKC72009.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandora
SCNpilot_expt_300_bf_scaffold_590_9
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10610..11263
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GRB8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02528.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
membrane protein
SCNpilot_expt_300_bf_scaffold_590_10
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11100..13199)
DNA (2100bp) protein (700aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035E2499
Uncharacterized protein {ECO:0000313|EMBL:GAO38855.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
peptidase S9 prolyl oligopeptidase active site domain-containing protein
SCNpilot_expt_300_bf_scaffold_590_11
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13260..14645)
DNA (1386bp) protein (462aa)
MFS transporter n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AB4D rbh
Uncharacterized protein {ECO:0000313|EMBL:KJK16926.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;
major facilitator family transporter
SCNpilot_expt_300_bf_scaffold_590_12
unknown

Not on your lists

14764..14955
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_590_13
unknown

Not on your lists

15387..15521
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_590_14
unknown

Not on your lists

15702..15929
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_590_15
Sphingomonas sp. KA1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16066..17328)
DNA (1263bp) protein (421aa)
dioxygenase (EC:1.14.12.-)
Putative phthalate dioxygenase n=1 Tax=Sphingomonas sp. KA1 RepID=Q0KJ88_9SPHN rbh
Putative phthalate dioxygenase {ECO:0000313|EMBL:BAF03454.1}; TaxID=164608 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
SCNpilot_expt_300_bf_scaffold_590_16
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17432..18601
DNA (1170bp) protein (390aa)
oxidoreductase (EC:1.-.-.-)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003712594 rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB08512.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
SCNpilot_expt_300_bf_scaffold_590_17
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18598..19590
DNA (993bp) protein (331aa)
4,5-dihydroxyphthalate decarboxylase (EC:4.1.1.55)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002FE4903 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL46181.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
SCNpilot_expt_300_bf_scaffold_590_18
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19632..19925
DNA (294bp) protein (98aa)
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:CDN50956.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhiz
SCNpilot_expt_300_bf_scaffold_590_19
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20014..21300
DNA (1287bp) protein (429aa)
Aryl-beta-glucosidase {ECO:0000313|EMBL:KGB53082.1}; EC=3.2.1.21 {ECO:0000313|EMBL:KGB53082.1};; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace
Glycoside hydrolase, family 1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023T4_SOLUE rbh
glycoside hydrolase family protein
SCNpilot_expt_300_bf_scaffold_590_20
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21303..23429)
DNA (2127bp) protein (709aa)
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:KGB53083.1}; EC=3.2.1.52 {ECO:0000313|EMBL:KGB53083.1};; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomo
glucose/galactose transporter (EC:3.2.1.52)
Beta-N-acetylhexosaminidase n=1 Tax=Gluconacetobacter hansenii ATCC 23769 RepID=D5QEQ6_GLUHA rbh
SCNpilot_expt_300_bf_scaffold_590_21
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23426..24916)
DNA (1491bp) protein (497aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
Carboxylesterase type B n=1 Tax=Caulobacter sp. AP07 RepID=J3AN06_9CAUL
carboxylesterase type b
SCNpilot_expt_300_bf_scaffold_590_22
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24913..27183)
DNA (2271bp) protein (757aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GSP7_9SPHN
Beta-glucosidase {ECO:0000313|EMBL:KGB53085.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81
beta-glucosidase
SCNpilot_expt_300_bf_scaffold_590_23
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27180..27812)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI00036819A7
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KGB53086.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source=
hypothetical protein
SCNpilot_expt_300_bf_scaffold_590_24
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28010..30301
DNA (2292bp) protein (764aa)
TonB-dependent receptor n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EA79_9SPHN rbh
TonB-dependent receptor {ECO:0000313|EMBL:KGB53088.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
TonB-dependent receptor rbh
SCNpilot_expt_300_bf_scaffold_590_25
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30327..31280
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037C0376
Xylose isomerase domain-containing protein {ECO:0000313|EMBL:EIL91692.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sour
Xylose isomerase domain-containing protein TIM barrel
SCNpilot_expt_300_bf_scaffold_590_26
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31277..32122
DNA (846bp) protein (282aa)
UPI0003D621FB related cluster n=1 Tax=unknown RepID=UPI0003D621FB
Lipolytic enzyme, G-D-S-L {ECO:0000313|EMBL:KGB53087.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
GDSL family lipase
SCNpilot_expt_300_bf_scaffold_590_27
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32127..32552)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0J885_9SPHN
Thioesterase superfamily protein {ECO:0000313|EMBL:EZP74646.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov
thioesterase superfamily protein
SCNpilot_expt_300_bf_scaffold_590_28
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32552..33532)
DNA (981bp) protein (327aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};;
hemH; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A1I5_9PROT rbh
SCNpilot_expt_300_bf_scaffold_590_29
unknown

Not on your lists

comp(33620..34747)
DNA (1128bp) protein (376aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_590_30
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35140..35340)
DNA (201bp) protein (67aa)
general stress protein CsbD n=1 Tax=Sphingomonas echinoides RepID=UPI00026CBD02
Uncharacterized protein {ECO:0000313|EMBL:AHE53081.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
general stress protein CsbD
Displaying items 1-30 of 60 in total

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