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SCNpilot_expt_300_bf_scaffold_591

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_591_1
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41..571)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IQE7_9BRAD
GCN5 family acetyltransferase {ECO:0000313|EMBL:ETR78348.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;
acetyltransferase
SCNpilot_expt_300_bf_scaffold_591_2
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(601..1617)
DNA (1017bp) protein (339aa)
dihydroflavonol-4-reductase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CAB98 rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:KHS48320.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
dihydroflavonol-4-reductase
SCNpilot_expt_300_bf_scaffold_591_3
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1726..3663
DNA (1938bp) protein (646aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-R
acetyl-CoA synthetase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037A45F4 rbh
acetyl-coenzyme A synthetase
SCNpilot_expt_300_bf_scaffold_591_4
Sphingomonas phyllosphaerae, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3798..4031
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4E614
SCNpilot_expt_300_bf_scaffold_591_5
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4191..6476
DNA (2286bp) protein (762aa)
peptidase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3C214 rbh
Phosphoenolpyruvate-protein phosphotransferase PtsP {ECO:0000313|EMBL:GAM00021.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomon
peptidase
SCNpilot_expt_300_bf_scaffold_591_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6593..7528
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000362EB35 rbh
Sphingomonas taxi strain 30a NODE_31, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26464.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
XRE family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_591_7
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7593..8510
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000372D51B rbh
Sphingomonas taxi strain 30a NODE_31, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26465.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
TPR repeat containing exported protein
SCNpilot_expt_300_bf_scaffold_591_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8561..9532
DNA (972bp) protein (324aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037A55A0 rbh
tRNA(Ile)-lysidine synthetase rbh
SCNpilot_expt_300_bf_scaffold_591_9
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9594..11561
DNA (1968bp) protein (656aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingo
ATP-dependent metalloprotease n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6C164 rbh
cell division protein FtsH
SCNpilot_expt_300_bf_scaffold_591_10
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12416..13660)
DNA (1245bp) protein (415aa)
cytochrome P450 n=2 Tax=Sphingomonas melonis RepID=UPI00037083DE rbh
Sphingomonas taxi strain 30a NODE_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28066.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
cytochrome P450
SCNpilot_expt_300_bf_scaffold_591_11
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13710..14957)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003757129 rbh
Membrane protein {ECO:0000313|EMBL:KHA64824.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20
membrane protein
SCNpilot_expt_300_bf_scaffold_591_12
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14954..15883)
DNA (930bp) protein (310aa)
ABC transporter ATP-binding protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B38A26 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHA64823.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sph
ABC transporter ATP-binding protein
SCNpilot_expt_300_bf_scaffold_591_13
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15913..16947
DNA (1035bp) protein (345aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1470591 specie
4Fe-4S ferredoxin n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9C6B
epoxyqueuosine reductase
SCNpilot_expt_300_bf_scaffold_591_14
unknown

Not on your lists

17231..17512
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_591_15
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17590..18834)
DNA (1245bp) protein (415aa)
5-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; EC=2.3.1.37 {ECO:0000256|RuleBase:RU910713};; 5-aminolevulinic acid synthase {ECO:0000256|RuleBase:RU910713}; Delta-ALA synthase {ECO:000025
5-aminolevulinate synthase (EC:2.3.1.37)
5-aminolevulinate synthase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003749C4D rbh
SCNpilot_expt_300_bf_scaffold_591_16
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18880..20505)
DNA (1626bp) protein (542aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000376A405 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT08311.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas t
SCNpilot_expt_300_bf_scaffold_591_17
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20508..21299)
DNA (792bp) protein (264aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=104605 species="Bacteria; Prote
Glutamate racemase n=1 Tax=Sphingomonas sp. S17 RepID=F3WU60_9SPHN rbh
glutamate racemase
SCNpilot_expt_300_bf_scaffold_591_18
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21475..22041
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000360547E
glycerol-3-phosphate acyltransferase
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043, ECO:0000313|EMBL:AJP73869.1}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphat
SCNpilot_expt_300_bf_scaffold_591_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22034..23104
DNA (1071bp) protein (357aa)
DNA processing protein DprA n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B77181 rbh
DNA processing protein DprA rbh
DNA processing protein DprA {ECO:0000313|EMBL:AIT08227.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomon
SCNpilot_expt_300_bf_scaffold_591_20
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23101..23469
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000370772A
Uncharacterized protein {ECO:0000313|EMBL:GAO56563.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
SCNpilot_expt_300_bf_scaffold_591_21
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23531..26053
DNA (2523bp) protein (841aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1219050 species="Bacteria; Proteobac
DNA topoisomerase 1 n=1 Tax=Sphingomonas sp. S17 RepID=F3WU64_9SPHN rbh
DNA topoisomerase I
SCNpilot_expt_300_bf_scaffold_591_22
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26094..26390)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Sphingomonas RepID=UPI0002896DF4
Uncharacterized protein {ECO:0000313|EMBL:KHA63297.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
SCNpilot_expt_300_bf_scaffold_591_23
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26475..27257)
DNA (783bp) protein (261aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-
Pantothenate synthetase n=1 Tax=Sphingomonas sp. S17 RepID=F3WU66_9SPHN rbh
pantoate--beta-alanine ligase
SCNpilot_expt_300_bf_scaffold_591_24
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27363..28193
DNA (831bp) protein (277aa)
ATPase n=2 Tax=Sphingomonas RepID=UPI000288BABC rbh
ATPase
ATPase {ECO:0000313|EMBL:AIT08351.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_expt_300_bf_scaffold_591_25
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28193..28462
DNA (270bp) protein (90aa)
WGS project CABT00000000 data, contig 2.448 n=1 Tax=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) RepID=F7WCZ2_SORMK
Molecular chaperone DnaJ {ECO:0000313|EMBL:KFG88540.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium he
molecular chaperone DnaJ
SCNpilot_expt_300_bf_scaffold_591_26
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28474..29859
DNA (1386bp) protein (462aa)
phosphomannomutase n=2 Tax=Sphingomonas RepID=UPI0002888390
phosphomannomutase
Phosphomannomutase {ECO:0000313|EMBL:AGH49948.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-
SCNpilot_expt_300_bf_scaffold_591_27
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29834..30622
DNA (789bp) protein (263aa)
Exonuclease family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X3J0_9SPHN rbh
Exodeoxyribonuclease X {ECO:0000313|EMBL:GAM00426.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas pa
exonuclease rbh
SCNpilot_expt_300_bf_scaffold_591_28
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31035..31871
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037B6A7D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK52313.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Me
SCNpilot_expt_300_bf_scaffold_591_29
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31868..32281
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037B6A7D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK52313.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Me
SCNpilot_expt_300_bf_scaffold_591_30
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32383..33417
DNA (1035bp) protein (345aa)
Phosphate-binding protein PstS n=1 Tax=Caulobacter crescentus OR37 RepID=R0EDJ8_CAUCE rbh
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobac
phosphate ABC transporter periplasmic phosphate-binding protein
Displaying items 1-30 of 38 in total

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