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SCNpilot_expt_300_bf_scaffold_698

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Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_698_1
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1929
DNA (1929bp) protein (643aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPL3_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:KGB53228.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
TonB-dependent receptor
SCNpilot_expt_300_bf_scaffold_698_2
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2162..2554
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAB7_9SPHN
Cytosolic protein {ECO:0000313|EMBL:KGB58662.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC3
hypothetical protein
SCNpilot_expt_300_bf_scaffold_698_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2567..3208
DNA (642bp) protein (214aa)
Transposase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYR4_9SPHN
Alkylhydroperoxidase ahpD core domain {ECO:0000313|EMBL:GAO55034.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
hypothetical protein
SCNpilot_expt_300_bf_scaffold_698_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3373..3990
DNA (618bp) protein (206aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPM3_9SPHN rbh
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ENY80400.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyx
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_expt_300_bf_scaffold_698_5
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4095..5144
DNA (1050bp) protein (350aa)
Vitamin-B12 independent methionine synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYQ6_9SPHN
Vitamin-B12 independent methionine synthase {ECO:0000313|EMBL:KGB58656.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" so
vitamin-B12 independent methionine synthase
SCNpilot_expt_300_bf_scaffold_698_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5222..6958
DNA (1737bp) protein (579aa)
Sulfatase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPV1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ETW96267.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
sulfatase
SCNpilot_expt_300_bf_scaffold_698_7
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7266..9194)
DNA (1929bp) protein (643aa)
Putative TonB-dependent receptor n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y462_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:KGB55567.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
TonB-dependent receptor
SCNpilot_expt_300_bf_scaffold_698_8
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9316..10566)
DNA (1251bp) protein (417aa)
oxidoreductase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CAC26 rbh
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_expt_300_bf_scaffold_698_9
Hyphomonas sp. T16B2, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10680..11168)
DNA (489bp) protein (163aa)
Phosphoserine aminotransferase n=1 Tax=Williamsia sp. D3 RepID=V8D5C5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KCZ47535.1}; TaxID=1280941 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. T16B
hypothetical protein
SCNpilot_expt_300_bf_scaffold_698_10
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11344..11874
DNA (531bp) protein (177aa)
Putative MarR family transcriptional regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHY7_9SPHN
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_698_11
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11871..13046
DNA (1176bp) protein (392aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:KEQ52732.1}; EC=1.3.8.1 {ECO:0000313|EMBL:KEQ52732.1};; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VXJ8_9SPHN rbh
SCNpilot_expt_300_bf_scaffold_698_12
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13058..14503)
DNA (1446bp) protein (482aa)
RND transporter n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B32C0B rbh
RND efflux system of outer membrane lipoprotein, nodT family {ECO:0000313|EMBL:GAO55213.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; N
RND efflux system outer membrane lipoprotein NodT
SCNpilot_expt_300_bf_scaffold_698_13
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14500..17739)
DNA (3240bp) protein (1080aa)
nodulation protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4D5E7 rbh
Cobalt-zinc-cadmium resistance protein czcA {ECO:0000313|EMBL:GAO55214.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
acriflavin resistance protein
SCNpilot_expt_300_bf_scaffold_698_14
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17736..20891)
DNA (3156bp) protein (1052aa)
acriflavin resistance protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B61004 rbh
Acriflavin resistance protein {ECO:0000313|EMBL:GAO55215.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
acriflavin resistance protein
SCNpilot_expt_300_bf_scaffold_698_15
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20888..22159)
DNA (1272bp) protein (424aa)
membrane protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B7A765 rbh
Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:GAO55216.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium
RND family efflux transporter MFP subunit
SCNpilot_expt_300_bf_scaffold_698_16
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22249..23157)
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=Alphaproteobacteria RepID=UPI000262C512 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KFD28112.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph
LysR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_698_17
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23389..26589
DNA (3201bp) protein (1067aa)
RND transporter n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J7G8_9SPHN rbh
RND transporter {ECO:0000313|EMBL:EQB32777.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense
acriflavin resistance protein
SCNpilot_expt_300_bf_scaffold_698_18
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26582..27763
DNA (1182bp) protein (394aa)
RND transporter n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KHL8_9SPHN rbh
RND transporter MFP subunit {ECO:0000313|EMBL:AJR23456.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
RND family efflux transporter MFP subunit
SCNpilot_expt_300_bf_scaffold_698_19
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27753..29168
DNA (1416bp) protein (472aa)
RND transporter n=1 Tax=Sphingomonas wittichii RepID=UPI00031B2CE1 rbh
RND transporter {ECO:0000313|EMBL:AJR23455.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
RND efflux system outer membrane lipoprotein
SCNpilot_expt_300_bf_scaffold_698_20
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29181..30557)
DNA (1377bp) protein (459aa)
RND transporter n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCBE4
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein {ECO:0000313|EMBL:KEZ19312.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomon
NodT family RND efflux system outer membrane lipoprotein
SCNpilot_expt_300_bf_scaffold_698_21
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30554..31435)
DNA (882bp) protein (294aa)
membrane protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631A28 rbh
Membrane protein {ECO:0000313|EMBL:KHA64682.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20
secretion protein HlyD family protein
SCNpilot_expt_300_bf_scaffold_698_22
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31432..31647)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00038258E0
Uncharacterized protein {ECO:0000313|EMBL:KHA64671.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
SCNpilot_expt_300_bf_scaffold_698_23
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31644..33692)
DNA (2049bp) protein (683aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCBE1 rbh
Fusaric acid resistance protein {ECO:0000313|EMBL:KHA64670.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo
fusaric acid resistance protein FusB/FusC rbh
SCNpilot_expt_300_bf_scaffold_698_24
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33952..36078
DNA (2127bp) protein (709aa)
dcp; peptidyl-dipeptidase Dcp (EC:3.4.15.5)
hypothetical protein, partial n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B441CA rbh
Peptidyl-dipeptidase dcp {ECO:0000313|EMBL:EGY02220.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospiril
SCNpilot_expt_300_bf_scaffold_698_25
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36122..36550)
DNA (429bp) protein (143aa)
Putative poly(Aspartic acid) hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPV9_9SPHN
putative poly(aspartic acid) hydrolase
Putative poly(Aspartic acid) hydrolase {ECO:0000313|EMBL:BAK65787.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="S
SCNpilot_expt_300_bf_scaffold_698_26
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36606..37346)
DNA (741bp) protein (247aa)
Putative poly(Aspartic acid) hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPV9_9SPHN
putative poly(aspartic acid) hydrolase
Putative poly(Aspartic acid) hydrolase {ECO:0000313|EMBL:BAK65787.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="S
SCNpilot_expt_300_bf_scaffold_698_27
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37382..38791)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HK99_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA98013.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
capsule synthesis CapA-like protein
SCNpilot_expt_300_bf_scaffold_698_28
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38881..40326)
DNA (1446bp) protein (482aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadacea
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HF38_9SPHN rbh
histidine kinase
SCNpilot_expt_300_bf_scaffold_698_29
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40332..41009)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0G2W2_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA98015.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
two component transcriptional regulator
SCNpilot_expt_300_bf_scaffold_698_30
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41205..43946)
DNA (2742bp) protein (914aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GBI5_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA98016.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
TonB-dependent receptor
Displaying items 1-30 of 72 in total

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