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SCNpilot_expt_300_bf_scaffold_852

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_852_1
Exiguobacterium sp. S17, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3..905)
DNA (903bp) protein (301aa)
Cobalt-zinc-cadmium resistance protein CzcA n=1 Tax=Exiguobacterium sp. S17 RepID=S3GHF8_9BACL
Cobalt-zinc-cadmium resistance protein CzcA {ECO:0000313|EMBL:EPE62033.1}; TaxID=856854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" so
czcA; heavy metal efflux pump CzcA
SCNpilot_expt_300_bf_scaffold_852_2
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(902..2056)
DNA (1155bp) protein (385aa)
metal transporter n=1 Tax=Sphingomonas melonis RepID=UPI000376DE79 rbh
DNA, contig: SP643 {ECO:0000313|EMBL:GAN14535.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
metal ion efflux membrane fusion protein family
SCNpilot_expt_300_bf_scaffold_852_3
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2053..3312)
DNA (1260bp) protein (420aa)
Outer membrane efflux family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2N7_9SPHN rbh
CzcC protein {ECO:0000313|EMBL:GAN14536.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis
metal ion efflux outer membrane factor protein family protein
SCNpilot_expt_300_bf_scaffold_852_4
unknown

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comp(3364..3717)
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_852_5
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3714..5039)
DNA (1326bp) protein (442aa)
Major Facilitator Superfamily protein n=1 Tax=Exiguobacterium sp. S17 RepID=S3FY44_9BACL rbh
DNA, contig: SP643 {ECO:0000313|EMBL:GAN14538.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
putative nickel resistance protein
SCNpilot_expt_300_bf_scaffold_852_6
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5128..5397
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002885993
Putative BCR, family protein {ECO:0000313|EMBL:KEZ21499.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
putative NreA protein
SCNpilot_expt_300_bf_scaffold_852_7
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5538..6524
DNA (987bp) protein (329aa)
cobalt transporter n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039C629A rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE52861.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
cation efflux protein
SCNpilot_expt_300_bf_scaffold_852_8
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6462..6851)
DNA (390bp) protein (130aa)
UPI0003D5BB7D related cluster n=1 Tax=unknown RepID=UPI0003D5BB7D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETI58576.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
SCNpilot_expt_300_bf_scaffold_852_9
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7212..8015)
DNA (804bp) protein (268aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJF7_9SPHN
HAD family hydrolase
HAD family hydrolase {ECO:0000313|EMBL:KKC25606.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. S
SCNpilot_expt_300_bf_scaffold_852_10
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8118..8393
DNA (276bp) protein (92aa)
transcriptional regulator n=1 Tax=Sphingomonas melonis RepID=UPI00037B5DB6
hypothetical protein
Transcriptional regulator {ECO:0000313|EMBL:KGB59346.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
SCNpilot_expt_300_bf_scaffold_852_11
unknown

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comp(8385..8579)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_852_12
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8748..9611)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AEF0 rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP66268.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas pau
hypothetical protein
SCNpilot_expt_300_bf_scaffold_852_13
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9599..10459)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C7I5_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EIZ79807.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
Displaying 13 items

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