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SCNpilot_expt_300_bf_scaffold_883

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_883_1
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17..259)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MFZ5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CCW15679.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap
hypothetical protein
SCNpilot_expt_300_bf_scaffold_883_2
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(271..483)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CS51_SPHYA
Cold-shock protein {ECO:0000313|EMBL:KHA64206.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant
cold-shock protein
SCNpilot_expt_300_bf_scaffold_883_3
unknown

Not on your lists

875..1099
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_883_4
unknown

Not on your lists

comp(1123..1251)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_883_5
unknown

Not on your lists

1462..1635
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_883_6
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1840..2127
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002DA9F1C
Uncharacterized protein {ECO:0000313|EMBL:KFG88911.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium her
SCNpilot_expt_300_bf_scaffold_883_7
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2178..2717
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488F97
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48662.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
SCNpilot_expt_300_bf_scaffold_883_8
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2764..3192
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631DB5
UPF0178 protein L485_22180 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
hypothetical protein
SCNpilot_expt_300_bf_scaffold_883_9
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3285..4412
DNA (1128bp) protein (376aa)
D-aminopeptidase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262BB6A rbh
Putative D-aminopeptidase {ECO:0000313|EMBL:GAO40266.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
peptidase S58 DmpA
SCNpilot_expt_300_bf_scaffold_883_10
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4526..4675
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V5U3_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ67659.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wi
SCNpilot_expt_300_bf_scaffold_883_11
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4706..5443)
DNA (738bp) protein (246aa)
Peptidase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J0G5_9SPHN rbh
Peptidase {ECO:0000313|EMBL:EQB31466.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;
peptidase T1 family protein
SCNpilot_expt_300_bf_scaffold_883_12
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5463..6317)
DNA (855bp) protein (285aa)
transglutaminase n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039E0781
Uncharacterized protein {ECO:0000313|EMBL:EQB12103.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium qui
transglutaminase
SCNpilot_expt_300_bf_scaffold_883_13
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6793..8619)
DNA (1827bp) protein (609aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039DB658 rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA97844.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
hypothetical protein
SCNpilot_expt_300_bf_scaffold_883_14
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8772..9467)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035EAD4C
Sphingomonas taxi strain 30a NODE_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29495.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
anti-sigma factor
SCNpilot_expt_300_bf_scaffold_883_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9471..9950)
DNA (480bp) protein (160aa)
RNA polymerase sigma70 n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B41E89
Sphingomonas taxi strain 30a NODE_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29496.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
RNA polymerase ECF-type sigma factor
SCNpilot_expt_300_bf_scaffold_883_16
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9981..11267
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037321C2 rbh
Sphingomonas taxi strain 30a NODE_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29497.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
subtilisin-like serine protease
SCNpilot_expt_300_bf_scaffold_883_17
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11357..12127
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B3F2CE
Sphingomonas taxi strain 30a NODE_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29498.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
hypothetical protein
SCNpilot_expt_300_bf_scaffold_883_18
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12352..14481
DNA (2130bp) protein (710aa)
TonB-dependent receptor n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCA73 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAM98241.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
TonB-dependent receptor
SCNpilot_expt_300_bf_scaffold_883_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14492..15892
DNA (1401bp) protein (467aa)
2-hydroxy-acid oxidase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCA72 rbh
lactate dehydrogenase rbh
Lactate dehydrogenase {ECO:0000313|EMBL:AIT08358.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas tax
SCNpilot_expt_300_bf_scaffold_883_20
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15966..17249
DNA (1284bp) protein (428aa)
Major facilitator transporter n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IEQ2_9SPHN rbh
major facilitator transporter
Major facilitator transporter {ECO:0000313|EMBL:CCA90777.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
SCNpilot_expt_300_bf_scaffold_883_21
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17246..18154
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI000368B172 rbh
Fructokinase {ECO:0000313|EMBL:KHA63470.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
ROK family protein
SCNpilot_expt_300_bf_scaffold_883_22
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18151..19611
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00031B783E rbh
MtlD protein {ECO:0000313|EMBL:BAQ47331.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticu
mannitol dehydrogenase
SCNpilot_expt_300_bf_scaffold_883_23
unknown

Not on your lists

19720..19869
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying 23 items

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