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SCNpilot_expt_300_bf_scaffold_816_28

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(26669..27427)

Top 3 Functional Annotations

Value Algorithm Source
GntR domain protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QMZ0_BRESC similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 230.0
  • Bit_score: 245
  • Evalue 7.50e-62
Lactate-responsive regulator LldR in Firmicutes of GntR family {ECO:0000313|EMBL:GAM98238.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1 similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 225.0
  • Bit_score: 248
  • Evalue 1.20e-62
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 230.0
  • Bit_score: 245
  • Evalue 2.10e-62

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Taxonomy

alpha proteobacterium U9-1i → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGATCCACCTGAACGGTTCGGGAGCCGCGCGCGCCAGCGGCAAGGGCAACTCGCTCGTCGATTGCGCCGTGGCGGCGGTGAAGGAGCATATCGCGAAGCACGCGATGCGCGTCGGTGACACGGTGCCGGGCGAGGCGTTCTTCGCCGAGCAGATCGGGGTCAGCCGCAGCGTGATGCGCGAGGCGTTCGGCGTGCTCGGCGCCCTGGGCGTGCTGGACGTGGCCAACGGGCGCCGTCCCCGCGTCGGGGCGCTCGACAGCGGCGTGCTGGCCGAGGCGTTCGGGCATGGCGTGGCGACCGCCCAGATCAGCGTCGCGGACGTATGGGACGTGCGCCGCGCGATCGAGGTGACGACGGTCAAGCTCGCGGCGGCGCAGCGCAGCAATGCCCAGGCCTCGACCATCCTCTCGCTGGCCGAGGCGATGGCGACCGATGCCGACGATGCCGGGCGCCGGGCCGCCCATGATGTCGCGCTGCACCTCGCGATCGCGGAGGCGAGCGGCAATCCGCTGTTCGGCAAGATCGTCGCTTCCTTCGGCCCGCTGATGGAGGTTGCCGTCCCGACGGCATGGCGAACCCGGACAAAGCGGCCGCAGCGCGAGGCGATGATCGAATGCCACCTCGCCATCGCGCGCGCCATCGCGACGCAGGACGTGAAGGCGGCGGCCAGCGCGATGGAGGCGCATTTCCGGGCGTCGATCCGCGACATGCTGCTGTCCGGCTTCAACCGGGGCGTCAATGGCGAGGACGCGGGCTGA
PROTEIN sequence
Length: 253
MIHLNGSGAARASGKGNSLVDCAVAAVKEHIAKHAMRVGDTVPGEAFFAEQIGVSRSVMREAFGVLGALGVLDVANGRRPRVGALDSGVLAEAFGHGVATAQISVADVWDVRRAIEVTTVKLAAAQRSNAQASTILSLAEAMATDADDAGRRAAHDVALHLAIAEASGNPLFGKIVASFGPLMEVAVPTAWRTRTKRPQREAMIECHLAIARAIATQDVKAAASAMEAHFRASIRDMLLSGFNRGVNGEDAG*