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SCNpilot_expt_300_bf_scaffold_816_29

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(27424..28146)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B73EDC similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 186.0
  • Bit_score: 139
  • Evalue 5.50e-30
Transcriptional regulator, AraC family {ECO:0000313|EMBL:KGB56822.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 40.0
  • Coverage: 225.0
  • Bit_score: 141
  • Evalue 1.20e-30
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 225.0
  • Bit_score: 139
  • Evalue 9.10e-31

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Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGACCGCCGAAGCGACCGGCACGTTCGCGATCGCCATCAGGGGGGCGGAGGCGGGCGCGGACGCCACGATCGTATTGCAGGCCGATATCGGGCTGGCGGAGGTGTCGATCCGCCTCGCATCGGCCGGGGAGGCGCCGCACGACGCGCTCGCGGTCACCATCCCGGCCATGAGCTTCGACGCATTGCGGTCGGCGATCGCACGGCTCGGCGATCACAGCTTCGCGATGACGCCCGCGCTTCTGCGCATCGCCCCCGCGCTGGTCGAGCGGGACGAGGACGTGCTCGAGGCCATCCACCGCTCCGTCAGGGCCGCCGAGTTCGCCTCGCAATTCATCACCACGCTGCTGGCCGATCAGTTCAGGAGGCGCACGCGATCGACGCGCCTGAGCGCTGACGACACCAGTCGCATCGCCATCGCCATGGACCTCATCAACGAGCGATGGCGTGAGGGGATGAGCATCGAGGGGCTGGCGCGCGCCTGCGGCCTGAACCGCGACAAGCTCGCGCGCGGTTTCCGCAGCCTGTTCAGCTGCAGCATCGGCGATGCGATCGCGGAGCGGAGGCTGGGCCATGCGGAGGAACTGCTGGCGACGACGGATATCGCCATCGCCACCGTGGCCTATCGCAGCGGCTATCTGAACGACGCCAGCTTCTGCCGCGCGTTCCGCCGGCGCTTCGGAATGTCCCCCGGCATGTATCGCGAGAGGAAGATGGCCGCATGA
PROTEIN sequence
Length: 241
MTAEATGTFAIAIRGAEAGADATIVLQADIGLAEVSIRLASAGEAPHDALAVTIPAMSFDALRSAIARLGDHSFAMTPALLRIAPALVERDEDVLEAIHRSVRAAEFASQFITTLLADQFRRRTRSTRLSADDTSRIAIAMDLINERWREGMSIEGLARACGLNRDKLARGFRSLFSCSIGDAIAERRLGHAEELLATTDIAIATVAYRSGYLNDASFCRAFRRRFGMSPGMYRERKMAA*