ggKbase home page

SCNpilot_expt_300_bf_scaffold_893_23

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(19889..20356)

Top 3 Functional Annotations

Value Algorithm Source
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 154.0
  • Bit_score: 280
  • Evalue 1.40e-72
Endonuclease III n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9W9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 155.0
  • Bit_score: 276
  • Evalue 1.90e-71
endonuclease III similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 154.0
  • Bit_score: 280
  • Evalue 2.80e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGGTCGCGCTGGGCGAGGAGGGGCTGAAGCAGCACATCCGCACGATCGGCCTGTTCAACACCAAGGCGAAGAACGTCATCGCGCTGAGCAAGGCGCTGATCGCCGACCATGATGGCGAGGTGCCGGCCGATCGCGATGCGCTGGAGAAGCTGCCCGGCGTCGGACGCAAGACCGCGAACGTGGTGATGAACGTCGCGTTCGGCGCGGAGACCTTCGCGGTGGACACGCATATCTTCCGCGTCGGCAACCGCACCGGCCTCGCTCCGGGCAAGACGCCGCTCGCCGTGGAGAAGAAGCTGGATAAGGAGACGCCCCAGCCGTTCCGCGTCCACGCGCACCACTGGCTGATCCTGCATGGCCGCTATGTCTGCAAGGCGCGCAAGCCGGAATGCTGGCGCTGCGTGGAAGTGGACCTGTGCGCCTACAAGCCCAAGACGCCCGCGCCTAAGGAGAAGGCGGCGGCTTGA
PROTEIN sequence
Length: 156
MVALGEEGLKQHIRTIGLFNTKAKNVIALSKALIADHDGEVPADRDALEKLPGVGRKTANVVMNVAFGAETFAVDTHIFRVGNRTGLAPGKTPLAVEKKLDKETPQPFRVHAHHWLILHGRYVCKARKPECWRCVEVDLCAYKPKTPAPKEKAAA*