ggKbase home page

SCNpilot_expt_300_bf_scaffold_902_18

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(19453..19839)

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B63CA3 similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 95.0
  • Bit_score: 118
  • Evalue 7.00e-24
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 106.0
  • Bit_score: 111
  • Evalue 2.40e-22
TonB-dependent receptor {ECO:0000313|EMBL:EZP50917.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 101.0
  • Bit_score: 111
  • Evalue 7.00e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
GTGTCGATCAATCGCATCCGCCCCGCGCTGCTCGCGGGCGTGGCCGCCGGCCTCGCCGTCTCCGCAATCCCCGCGCAGGCCCAGAACGTGGACACCGCCGCTCCCGCCGCCGCCTCCGACAGCGCGGGGCTGGGCGATATCGTCGTCACCGCCGAGCGCCGCAGCGAGAATTTGCAGCGCGTGCCGGTGTCGGTCGCGGCGGTCGGCGGCGCCGACCTGCGCAACTTCCAGGCGGCGGGCGAGGACATCCTCGCGCTCTCCGGTCGCGTGCCGAGCCTTTACGTCGAGACGACAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGATCATCCAGGACGACGTCGTGCTCGAACATGTCGTGCTGAAGTCGAACCCGGTCTATGA
PROTEIN sequence
Length: 129
VSINRIRPALLAGVAAGLAVSAIPAQAQNVDTAAPAAASDSAGLGDIVVTAERRSENLQRVPVSVAAVGGADLRNFQAAGEDILALSGRVPSLYVETTXXXXXXXXXXXDHPGRRRARTCRAEVEPGL*