ggKbase home page

SCNpilot_expt_300_bf_scaffold_902

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_902_1
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171..1463)
DNA (1293bp) protein (431aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei (strain 1710b) RepID=Q3JXX0_BURP1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA48176.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source
SCNpilot_expt_300_bf_scaffold_902_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2411..3133
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B7185C
Sphingomonas taxi strain 30a NODE_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29012.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
peptidase M23
SCNpilot_expt_300_bf_scaffold_902_3
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3230..4561)
DNA (1332bp) protein (444aa)
MFS transporter n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5DD4E rbh
Major facilitator transporter {ECO:0000313|EMBL:KHS46599.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
major facilitator transporter
SCNpilot_expt_300_bf_scaffold_902_4
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4673..6628
DNA (1956bp) protein (652aa)
citryl-CoA lyase (EC:4.1.3.34)
ferredoxin n=1 Tax=Sphingomonas elodea RepID=UPI00026308A2
Uncharacterized protein {ECO:0000313|EMBL:GAO38491.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
SCNpilot_expt_300_bf_scaffold_902_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6660..7802)
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037F9602
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AIT06372.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_expt_300_bf_scaffold_902_6
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7857..8957)
DNA (1101bp) protein (367aa)
radical SAM protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B70A0B rbh
DNA repair photolyase {ECO:0000313|EMBL:KHA65480.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
DNA repair photolyase
SCNpilot_expt_300_bf_scaffold_902_7
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8989..9207)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035EAF7A
Sphingomonas taxi strain 30a NODE_52, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29185.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
hypothetical protein
SCNpilot_expt_300_bf_scaffold_902_8
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9192..9743)
DNA (552bp) protein (184aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadale
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3D190
5-formyltetrahydrofolate cyclo-ligase
SCNpilot_expt_300_bf_scaffold_902_9
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9881..10183)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B55E26
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo
hypothetical protein
SCNpilot_expt_300_bf_scaffold_902_10
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10183..10359)
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:EZP57525.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_expt_300_bf_scaffold_902_11
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10519..11523
DNA (1005bp) protein (335aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomona
gapA; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Sphingomonas melonis RepID=UPI00036E3BBA rbh
SCNpilot_expt_300_bf_scaffold_902_12
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11588..12778
DNA (1191bp) protein (397aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1470591 species="Bacteria;
pgk; phosphoglycerate kinase (EC:2.7.2.3) rbh
phosphoglycerate kinase n=1 Tax=Sphingomonas melonis RepID=UPI000366748A rbh
SCNpilot_expt_300_bf_scaffold_902_13
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12901..13620)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036D8EE9
Uncharacterized protein {ECO:0000313|EMBL:KHA64388.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
SCNpilot_expt_300_bf_scaffold_902_14
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13617..14825)
DNA (1209bp) protein (403aa)
toxic anion resistance protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036375CC rbh
Toxic anion resistance family protein {ECO:0000313|EMBL:EZP50919.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
toxic anion resistance protein
SCNpilot_expt_300_bf_scaffold_902_15
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14936..15451)
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IL59_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65122.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
SCNpilot_expt_300_bf_scaffold_902_16
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15560..17380
DNA (1821bp) protein (607aa)
GTP-binding protein TypA n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S4P6_9SPHN rbh
GTP-binding protein TypA
GTP-binding protein TypA {ECO:0000313|EMBL:AGH50995.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_expt_300_bf_scaffold_902_17
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17556..19493)
DNA (1938bp) protein (646aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037FED2B
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AGH50324.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
SCNpilot_expt_300_bf_scaffold_902_18
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19453..19839)
DNA (387bp) protein (129aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B63CA3
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:EZP50917.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_expt_300_bf_scaffold_902_19
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20029..20430)
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X3E2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAM00046.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
hypothetical protein
SCNpilot_expt_300_bf_scaffold_902_20
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20564..20908
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X3E3_9SPHN
DNA, contig: SP658 {ECO:0000313|EMBL:GAN15462.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
SCNpilot_expt_300_bf_scaffold_902_21
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21008..21283
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037B6B45
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
glutathione peroxidase
SCNpilot_expt_300_bf_scaffold_902_22
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21280..22827)
DNA (1548bp) protein (516aa)
glycosyl transferase family 1 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B42F41 rbh
glycosyl transferase family 1
Glycosyl transferase family 1 {ECO:0000313|EMBL:AIT07576.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
Displaying 22 items

View Taxonomy