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SCNpilot_expt_300_bf_scaffold_631_11

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(11269..11937)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037BC0C4 similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 220.0
  • Bit_score: 229
  • Evalue 3.70e-57
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EZP49023.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 220.0
  • Bit_score: 229
  • Evalue 5.20e-57
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 220.0
  • Bit_score: 223
  • Evalue 5.80e-56

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
GTGCGCCTGCTGATCGTCGACGACAACCGCGAGCTGGCCGAGGCGCTCGCCGCCGCGTTCCTGAAGCGCGACATCCGCTGCGACATCGCCGGCACCGCGCGCGACGCCGAGCAACTCGCCACCACCACCGATTATGCCGCGATGGTGCTCGATCTCGGGCTGCCCGACGAGGACGGGCTGACCCTGCTCCGCCGCCTGCGCGCGCAGCGCCGCACCGTGCCGGTGATCGTGCTCAGCGCGCGTGGCGCGGGGGAGATGCGCGTGCTCGGGCTGGAAAGCGGCGCCGACGATTATCTCGTCAAGCCGTTCCTGTTCGTCGAACTGCACGCGCGGCTGTCGGCGATCCTGCGGCGGCAGGGCGGCTATGTCGAGGACGTGCTGCGCGCCGCCGACCTGACGCTCGACACGCGCAGCCGCGAGGTGCGCGCGGCCGGCGCGCCGGTGCCGCTGTCGGTGCGCGAGATCGAGCTGCTCGAGCTGCTGATGCGCCGCGCCGGCCATGTCGTGCCCAAGCGCGTGCTGGCGGACCAGCTTTTCGGCGCGGGCGACGCGCTCGGCTCGAATGCGGTCGACGTCTATGTCCACCGCGTTCGCCGCAAGCTGGAGGATTGCGCGGCGGTGAAGGTGCAGACGGTGCGCGGGATCGGATACATGCTATCCACCCCATGA
PROTEIN sequence
Length: 223
VRLLIVDDNRELAEALAAAFLKRDIRCDIAGTARDAEQLATTTDYAAMVLDLGLPDEDGLTLLRRLRAQRRTVPVIVLSARGAGEMRVLGLESGADDYLVKPFLFVELHARLSAILRRQGGYVEDVLRAADLTLDTRSREVRAAGAPVPLSVREIELLELLMRRAGHVVPKRVLADQLFGAGDALGSNAVDVYVHRVRRKLEDCAAVKVQTVRGIGYMLSTP*