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SCNpilot_expt_300_bf_scaffold_631

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_631_1
unknown

Not on your lists

comp(197..304)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_631_2
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(397..825)
DNA (429bp) protein (143aa)
Transcriptional regulator, MarR family n=2 Tax=Sphingomonas wittichii RepID=A5VEY2_SPHWW
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABQ70848.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
SCNpilot_expt_300_bf_scaffold_631_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

906..2063
DNA (1158bp) protein (386aa)
multidrug ABC transporter permease n=2 Tax=Sphingomonas melonis RepID=UPI000375AF19 rbh
multidrug ABC transporter permease rbh
Multidrug ABC transporter permease {ECO:0000313|EMBL:AIT07958.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sph
SCNpilot_expt_300_bf_scaffold_631_4
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2342..3595
DNA (1254bp) protein (418aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VEY4_SPHWW rbh
DSBA oxidoreductase {ECO:0000313|EMBL:AJR23210.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2
EmrB/QacA family drug resistance transporter
SCNpilot_expt_300_bf_scaffold_631_5
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3606..5036
DNA (1431bp) protein (477aa)
Outer membrane protein OprN n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z805_SPHJU rbh
RND transporter {ECO:0000313|EMBL:AJR23209.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
oprN; outer membrane protein OprN rbh
SCNpilot_expt_300_bf_scaffold_631_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5017..6414)
DNA (1398bp) protein (466aa)
transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB50D rbh
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIT06895.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
SCNpilot_expt_300_bf_scaffold_631_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6578..6733
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000376B41F
DNA, contig: SP651 {ECO:0000313|EMBL:GAN15189.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
SCNpilot_expt_300_bf_scaffold_631_8
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6828..8423
DNA (1596bp) protein (532aa)
Isocitrate lyase {ECO:0000313|EMBL:KKC25086.1}; EC=4.1.3.1 {ECO:0000313|EMBL:KKC25086.1};; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sph
Isocitrate lyase (EC:4.1.3.1)
isocitrate lyase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037A72A3 rbh
SCNpilot_expt_300_bf_scaffold_631_9
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8542..9930)
DNA (1389bp) protein (463aa)
L-serine ammonia-lyase n=1 Tax=Sphingomonas sp. S17 RepID=F3WVP0_9SPHN rbh
L-serine dehydratase {ECO:0000313|EMBL:GAM01280.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas para
L-serine dehydratase 1
SCNpilot_expt_300_bf_scaffold_631_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9959..11272)
DNA (1314bp) protein (438aa)
histidine kinase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B5B194
two-component hybrid sensor and regulator Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
sensor signal transduction histidine kinase
SCNpilot_expt_300_bf_scaffold_631_11
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11269..11937)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037BC0C4
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EZP49023.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S
transcriptional regulator
SCNpilot_expt_300_bf_scaffold_631_12
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11954..12274)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00037B57F9
Uncharacterized protein {ECO:0000313|EMBL:KFF10929.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
SCNpilot_expt_300_bf_scaffold_631_13
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12293..12814)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C144
DNA, contig: SP643 {ECO:0000313|EMBL:GAN14722.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
SCNpilot_expt_300_bf_scaffold_631_14
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12975..13688
DNA (714bp) protein (238aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
ribonuclease PH n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000366C992 rbh
ribonuclease PH
SCNpilot_expt_300_bf_scaffold_631_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13685..14311
DNA (627bp) protein (209aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000381CA57 rbh
nucleoside-triphosphate diphosphatase
SCNpilot_expt_300_bf_scaffold_631_16
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14325..15194)
DNA (870bp) protein (290aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B469D5 rbh
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein {ECO:0000313|EMBL:EZP51182.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sp
SCNpilot_expt_300_bf_scaffold_631_17
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15258..16235)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000369EAF0
Flagellar motor protein {ECO:0000313|EMBL:KHA65664.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
flagellar motor protein
SCNpilot_expt_300_bf_scaffold_631_18
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16291..17154)
DNA (864bp) protein (288aa)
flagellar motor protein MotA n=2 Tax=Sphingomonas melonis RepID=UPI00037DC318 rbh
Sphingomonas taxi strain 30a NODE_39, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26802.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
flagellar motor protein MotA rbh
SCNpilot_expt_300_bf_scaffold_631_19
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17258..18148)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000368CD83
Uncharacterized protein {ECO:0000313|EMBL:KHA65736.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
SCNpilot_expt_300_bf_scaffold_631_20
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18148..19494)
DNA (1347bp) protein (449aa)
flagellar hook protein FlgK n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC924 rbh
flagellar hook protein FlgK
Flagellar hook protein FlgK {ECO:0000313|EMBL:AJP73525.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomon
SCNpilot_expt_300_bf_scaffold_631_21
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19494..19835)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003676C4F
Sphingomonas taxi strain 30a NODE_39, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26804.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
rod-binding protein
SCNpilot_expt_300_bf_scaffold_631_22
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19832..20989)
DNA (1158bp) protein (386aa)
flagellar P-ring protein FlgI n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003745B16 rbh
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteo
flagellar P-ring protein FlgI rbh
SCNpilot_expt_300_bf_scaffold_631_23
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20989..21678)
DNA (690bp) protein (230aa)
Flagellar L-ring protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X0R1_9SPHN rbh
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomo
flagellar L-ring protein FlgH
SCNpilot_expt_300_bf_scaffold_631_24
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21693..22481)
DNA (789bp) protein (263aa)
flagellar basal body rod protein FlgG n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B750C3 rbh
Flagellar basal body rod protein FlgG {ECO:0000313|EMBL:KHA63792.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S
flgG; flagellar basal body rod protein FlgG
SCNpilot_expt_300_bf_scaffold_631_25
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22494..23246)
DNA (753bp) protein (251aa)
flagellar basal-body rod protein FlgF n=1 Tax=Sphingomonas melonis RepID=UPI00037D30DF rbh
flagellar basal-body rod protein FlgF
Flagellar basal-body rod protein FlgF {ECO:0000313|EMBL:AIT07063.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
SCNpilot_expt_300_bf_scaffold_631_26
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23273..24535)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037D53F6 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP73522.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_expt_300_bf_scaffold_631_27
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24557..25249)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037CD0E4
Flagellar hook capping protein {ECO:0000313|EMBL:KHA63794.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
flagellar hook capping protein
SCNpilot_expt_300_bf_scaffold_631_28
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25253..25660)
DNA (408bp) protein (136aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Sphingomonas sp. S17 RepID=F3X0R6_9SPHN
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=
flagellar basal body rod protein FlgC
SCNpilot_expt_300_bf_scaffold_631_29
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25663..26007)
DNA (345bp) protein (115aa)
flagellar basal body rod protein FlgB n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC91B
flgB; flagellar basal body rod protein FlgB
Flagellar basal body rod protein FlgB {ECO:0000313|EMBL:AIT07067.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
SCNpilot_expt_300_bf_scaffold_631_30
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26400..26813
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036172D2
Chemotaxis protein MotA {ECO:0000313|EMBL:GAM01141.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
biopolymer transporter ExbB
Displaying items 1-30 of 120 in total

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