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SCNpilot_expt_300_bf_scaffold_1026_1

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(2..313)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 104.0
  • Bit_score: 219
  • Evalue 2.50e-54
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Sphingomonas elodea RepID=UPI0002630428 similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 104.0
  • Bit_score: 218
  • Evalue 4.00e-54
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 97.1
  • Coverage: 104.0
  • Bit_score: 218
  • Evalue 8.70e-55

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Taxonomy

Sphingomonas changbaiensis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGAACGAGATGACCCCCTTCGCGAACCCGATCGCGAAACCCGAGACCTTCGACCAGATCCAGATCGGCATTGCGTCCCCGGATCGCATCCGCTCGTGGTCGTTCGGCGAGATCAAGAAGCCGGAGACGATCAACTACCGCACGTTCAAGCCCGAGCGTGACGGCCTGTTCTGCGCGCGCATCTTCGGCCCGATCAAGGATTACGAATGCTTGTGCGGCAAGTACAAGCGCATGAAATACAAAGGCATCGTCTGCGAGAAGTGCGGCGTGGAGGTCACCGTCTCCAAGGTCCGCCGCGAGCGCATGGGCCAT
PROTEIN sequence
Length: 104
MNEMTPFANPIAKPETFDQIQIGIASPDRIRSWSFGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKYKGIVCEKCGVEVTVSKVRRERMGH