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SCNpilot_expt_300_bf_scaffold_1026_11

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(12794..13486)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4A755 similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 230.0
  • Bit_score: 428
  • Evalue 5.70e-117
  • rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 230.0
  • Bit_score: 417
  • Evalue 1.10e-113
50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 230.0
  • Bit_score: 408
  • Evalue 1.30e-111
  • rbh

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGGCGAAGCTGACCAAGAAGCATAAGGCGGTCACGATCGATCGTGAGAAGCTGCACGGCGTGGACGAGGCGATCGCGCTGGCCAAGGCCAACGCCACGTCGAAGTTCGACGAGACGATCGAGATCGCGCTGAACCTCGGCGTCGATCCGCGCCACGCCGACCAGATGGTGCGCGGCGTCGTCACGCTGCCCGCCGGCACCGGCAAGACGGTGCGCGTCGGCGTGTTCGCCAAGGGCGCGAAGGCCGATGAGGCGCGCGCCGCCGGTGCCGACGTCGTCGGTGCGGAAGACCTGATGGAGACGATCCAGGGCGGCACGATCGATTTCGACCGCTGCATCGCGACCCCGGACATGATGGGCGTCGTCGGCCGTCTCGGCAAGGTGCTCGGCCCGAAGGGCCTGATGCCGAACCCGAAGCTCGGCACCGTGACGATGAACGTCGCCGAGGCGGTGAAGGCGGCCAAGGGCGGCCAGGTGGAATATCGCGTCGAGAAGGCCGGCATCATCCACTCCGGCATCGGCAAGGCGAGCTTCGCCGCCGAGGACCTGCGCCGCAACTTCGACGCGCTGGTCGACGCGGTGGTGAAGGCCAAGCCGTCGGGCGCCAAGGGCAAGTATGTCCGCAAGATCGCCGTCAGCTCCACGATGGGGCCGGGCATCAAGGTGGACGTGGCGGAGGTCGCCGGCGCCTGA
PROTEIN sequence
Length: 231
MAKLTKKHKAVTIDREKLHGVDEAIALAKANATSKFDETIEIALNLGVDPRHADQMVRGVVTLPAGTGKTVRVGVFAKGAKADEARAAGADVVGAEDLMETIQGGTIDFDRCIATPDMMGVVGRLGKVLGPKGLMPNPKLGTVTMNVAEAVKAAKGGQVEYRVEKAGIIHSGIGKASFAAEDLRRNFDALVDAVVKAKPSGAKGKYVRKIAVSSTMGPGIKVDVAEVAGA*