ggKbase home page

SCNpilot_expt_300_bf_scaffold_1048_4

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 4349..5260

Top 3 Functional Annotations

Value Algorithm Source
Conjugative transfer protein TrbB n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MMJ8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 303.0
  • Bit_score: 512
  • Evalue 3.00e-142
Conjugative transfer protein TrbB {ECO:0000313|EMBL:CCW17974.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphin similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 303.0
  • Bit_score: 512
  • Evalue 4.20e-142
conjugal transfer protein TrbB similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 302.0
  • Bit_score: 508
  • Evalue 1.20e-141

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGGCTCGGCGATCGCCGAATGGCTCGCCGACCCCGCGGTCATCGAGATCATGCTCAATCCCGACGGCCGCTTGTGGGTCGATCGGCTCGGCGCGGGGATCAGCGACACCGGAAAGTCCATGTCACCAGCCGACGGCGAACGCATCGTCCGCCTGGTCGCGCACCATGTCGGCGCCGAGGTTCACGCCCGAAGACCCCGTGTCTCGGCGGAGCTGCCCGAAACCGGCGAGCGGTTCGAGGGCCTGATCCCGCCGGTCGTGACGGCGCCCACGTTCGCGATCCGCAAGCCCGCCGTCGCCGTCTTCTCGCTCGACGATTATGTCGACGCCGCGATCATGTCGCGATCGCACGCGACGATCCTGCGCGATGCGGTCGCCGAGCGGCGGAACATCCTCGTCGCCGGCGGCACCGGGACCGGCAAGACGACGCTGACCAACGCGCTGCTCGCCGAGATCGCGCGGACCAACGATCGCGTCGTCCTGATCGAGGATACCCGCGAGCTGCAATGCGCCGCGCCGAACCTCGTCGCGATGCGGACCAAGGATGGCGTCGCGTCGCTCTCCGACCTCGTAAGATCCTCGCTGCGCCTGCGCCCCGACCGTATCCCGATCGGCGAGGTGCGCGGCGCCGAGGCGCTCGACCTCCTGAAGGCGTGGGGCACCGGCCACCCAGGCGGCGTCGGCACGATCCATGCCGGGACCGCGATCGGCGCGCTGCGGCGCATGGAGCAACTCATCCAGGAAGCGGTCGTGACCGTACCGCGCGCGCTGCTCGCCGAAACCATCGACCTGATCGCGGTGCTGGTCCGCGACGGCACCGGACGCCGGCTTGCCGAGCTGGCCCTTGTCGAGGGGCTCGACCCCGCCACCGGCGACTACCGCCTCACGCCTTTCCACCAACCGGAGATCTGA
PROTEIN sequence
Length: 304
MGSAIAEWLADPAVIEIMLNPDGRLWVDRLGAGISDTGKSMSPADGERIVRLVAHHVGAEVHARRPRVSAELPETGERFEGLIPPVVTAPTFAIRKPAVAVFSLDDYVDAAIMSRSHATILRDAVAERRNILVAGGTGTGKTTLTNALLAEIARTNDRVVLIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAWGTGHPGGVGTIHAGTAIGALRRMEQLIQEAVVTVPRALLAETIDLIAVLVRDGTGRRLAELALVEGLDPATGDYRLTPFHQPEI*