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SCNpilot_expt_300_bf_scaffold_1048

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1048_1
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..483)
DNA (483bp) protein (161aa)
AMP-dependent synthetase and ligase n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CD20_ALCDB
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:AFT70320.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alca
SCNpilot_expt_300_bf_scaffold_1048_2
bacterium YEK0313, Bacteria

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610..1359
DNA (750bp) protein (250aa)
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Thauera sp. 63 RepID=N6X6V9_9RHOO
Glucose 1-dehydrogenase {ECO:0000313|EMBL:CEJ15882.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_expt_300_bf_scaffold_1048_3
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1427..3910
DNA (2484bp) protein (828aa)
UPI0003D6520C related cluster n=1 Tax=unknown RepID=UPI0003D6520C rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI65815.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
TonB-dependent receptor
SCNpilot_expt_300_bf_scaffold_1048_4
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4349..5260
DNA (912bp) protein (304aa)
Conjugative transfer protein TrbB n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MMJ8_9SPHN
Conjugative transfer protein TrbB {ECO:0000313|EMBL:CCW17974.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphin
conjugal transfer protein TrbB
SCNpilot_expt_300_bf_scaffold_1048_5
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5262..5627
DNA (366bp) protein (122aa)
Conjugal transfer protein TrbC n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPV3_SPHAL
conjugal transfer protein TrbC
Conjugal transfer protein TrbC {ECO:0000313|EMBL:ABF54319.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.
SCNpilot_expt_300_bf_scaffold_1048_6
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5627..5896
DNA (270bp) protein (90aa)
Type IV secretory pathway, VirB3-like family protein n=2 Tax=Sphingomonadaceae RepID=F3X045_9SPHN
Conjugal transfer protein {ECO:0000313|EMBL:EQB12126.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium l
type IV secretory pathway, VirB3 family protein
SCNpilot_expt_300_bf_scaffold_1048_7
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5893..8364
DNA (2472bp) protein (824aa)
conjugal transfer protein TrbE n=1 Tax=Sphingobium xenophagum RepID=UPI000361BB6A rbh
Conjugative transfer protein TrbE {ECO:0000313|EMBL:KEZ19461.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium
conjugal transfer ATPase TrbE
Displaying 7 items

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