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SCNpilot_expt_300_bf_scaffold_1048_6

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 5627..5896

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirB3-like family protein n=2 Tax=Sphingomonadaceae RepID=F3X045_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 85.0
  • Bit_score: 169
  • Evalue 1.40e-39
Conjugal transfer protein {ECO:0000313|EMBL:EQB12126.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium l similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 85.0
  • Bit_score: 169
  • Evalue 2.00e-39
type IV secretory pathway, VirB3 family protein similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 85.0
  • Bit_score: 168
  • Evalue 1.20e-39

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Taxonomy

Sphingobium lactosutens → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGATCGGCGATGAGGCCGTTCCCGGCTATTTCGCGCCGGTCCATCGCGCGCTCAGCGAGCCGATCCTGCTGGGCGGCGCGCCGCGCGCGCTGGCGATCGTCAACGGGACGCTCGCCGGCGCGATCGGGCTCGGCCTGCGCCTGTGGATCGCCGGCATCGTGATCTGGGCGATCGGTCATGCCTTGTCGGTCTGGGCGGCGCGGCGCGACCCCCAGTTCGTCGACGTCGCCCGCCGTCACCTCCGCTATCCGGCCTGGATGCGGCCATGA
PROTEIN sequence
Length: 90
MIGDEAVPGYFAPVHRALSEPILLGGAPRALAIVNGTLAGAIGLGLRLWIAGIVIWAIGHALSVWAARRDPQFVDVARRHLRYPAWMRP*