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SCNpilot_expt_300_bf_scaffold_1057_7

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(3760..5682)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D59DBA related cluster n=1 Tax=unknown RepID=UPI0003D59DBA similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 640.0
  • Bit_score: 1288
  • Evalue 0.0
  • rbh
RNA-directed DNA polymerase {ECO:0000313|EMBL:ETI64602.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 640.0
  • Bit_score: 1288
  • Evalue 0.0
RNA-directed DNA polymerase (Reverse transcriptase) similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 612.0
  • Bit_score: 950
  • Evalue 2.60e-274

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Taxonomy

Sphingobium sp. C100 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1923
ATGCTGCCAGAAACTGTGAAAGGCCGGTTGGAGGCCATTCCGGCGCTCGTTGCGTCGGGCAAAAGGGTGAATGGACTCTATCGTCTGATGGGGTCTCGCCTCCTTTGGGAGGAGGGGCTCCAGAAGATCGGATCCAACAAGGGTGCGATGACGCCGGGTATTGACGGCGAGACCTTCGCGGACTTCGGACCGGAAGACCTCGACCCGATTATCGCCAGCGTGACGGCAGGGACCTATGATCCCAAACCAGTGCGTCGGGTGTTTATCCCGAAAGGCAAGGGCAAACGGCGTCCGCTGGGCATTCCCACGCGCGACGACCGCCTCGTTCAGGAAGTGGCGCGGCAACTGCTCGAACGGATCTATGAACCGGTGTTCTCGAACGCCTCCCATGGATTCCGGCCGGGCCGGTCGTGTCATACGGCGCTTGAACACGTCAAAGCCGTATGGACGGGGGTGAAATGGCTCGTAGATGTGGATGTCGCGGGGTTCTTCGAGAACATCGACCACGACATCCTCCTGCGGCTGTTGCGGAAAAGGATCGATGACGAGAAATTCATCGGCTTGATCGGCAGCATGCTTAAGGCGGGTGTTATGGAAGACCGGGTTCACACCCGGACCTACAGCGGCACTCCGCAGGGCGGTATCGTCTCTCCAATCTTGGCCAACATCTACCTCCATGAACTCGATATGTTCATGGCGGAACGGATCGCGGCTTTCGAGAGGGGGAAGGTCCGTGCCACGAACCCGGAATATGGGCGACTGGCTGGGCGCATCCAGAAACAACGGAAGCGCGTCACCATGCTGCGGGCCAAAGACAATGTCGACGAGGTGAAGGTTGCGGCCTCCTTGGCCAAAATCCAAACCTTACTGCCGCAAAAGCGGTCCATCCCGTCGAGAGACGCGATGGACCCCGGTTATCGCCGACTTCGTTACTGTCGCTACGCGGACGACTTCATGATTGGGGTTATCGGTAGCAAGGAGGATGCACGAAGCGTGTTCGCCGAAGTCAGGGCATTCCTGACCGAGGCGCTGGCGCTCACGGTGTCCGAGGAGAAAAGCGGTATCCGCAAGGCGAGCGATGGAGCCGCCTTCCTTGGATATGAGGTCCGCACATATACGACACGCCAACGGGTTGTCCGGAGCCGACAAGGTTCCGTCAGCTTCCTTCGTAGGCCGCCGTCGGAAGTGATGCAGCTGCATGTCCCTTGGGAGAAGGTCCACGCGTTCGCTTCTGCAAAAGGTTATGGTGATCTGTCGGTGTTGAAGCCGCGTCATCGTAGCCTGCTGCTCAGCTGCAGCGACGTTGAGATCGTCCTAGCTTACAACGCCGAATTGCGGGGTTTTGCGAACTACTATGCTCTCGCCAAGGATGTGAGCTTCAAGCTGAACAGGCTTGAGTTTCTCCAGCGGTGGAGCTTGTTCAAGACCTTGGCCAGCAAGCACAAAACCAATGTGCGAGCGGTCGTGGCCCGCATGAGGACGGGGCAGGAATTCACCATCGGCTACGACGTCGATGGCCAGCCCCGATCGGTCAAAGTCTGGAAACTGGCTCATCTGAAACGTGATCCGGCCACCTCGTCCAGGATTGATATCCAGCCTTGGACGCAGGTGTTCACCCACTCACGTACGGACTGGGTTGATCGTCAGAATGCCAAGCAATGCGAGGCTTGCGGTCGATCCGATGTTCCGTGTCAGGTGCACCATATCCGGGGGATGGCCGATGTTTCGCACCGCGGTTTTGTCGTGAGAATGAAGGTGGCACGCGCCCGCAGGACGGTGGTCCTGTGCGAGCAATGCCACTGGGATACTCACAGAGGCCGCCTGCCCGATCTACGGCAAAGTGATGGTTCGTCACAGTGGAGAGCCGCATGCGGTGAAAGCTGCACGTGCGGTTCGGCGGGGGGATCAGGGCTGACTCCATGA
PROTEIN sequence
Length: 641
MLPETVKGRLEAIPALVASGKRVNGLYRLMGSRLLWEEGLQKIGSNKGAMTPGIDGETFADFGPEDLDPIIASVTAGTYDPKPVRRVFIPKGKGKRRPLGIPTRDDRLVQEVARQLLERIYEPVFSNASHGFRPGRSCHTALEHVKAVWTGVKWLVDVDVAGFFENIDHDILLRLLRKRIDDEKFIGLIGSMLKAGVMEDRVHTRTYSGTPQGGIVSPILANIYLHELDMFMAERIAAFERGKVRATNPEYGRLAGRIQKQRKRVTMLRAKDNVDEVKVAASLAKIQTLLPQKRSIPSRDAMDPGYRRLRYCRYADDFMIGVIGSKEDARSVFAEVRAFLTEALALTVSEEKSGIRKASDGAAFLGYEVRTYTTRQRVVRSRQGSVSFLRRPPSEVMQLHVPWEKVHAFASAKGYGDLSVLKPRHRSLLLSCSDVEIVLAYNAELRGFANYYALAKDVSFKLNRLEFLQRWSLFKTLASKHKTNVRAVVARMRTGQEFTIGYDVDGQPRSVKVWKLAHLKRDPATSSRIDIQPWTQVFTHSRTDWVDRQNAKQCEACGRSDVPCQVHHIRGMADVSHRGFVVRMKVARARRTVVLCEQCHWDTHRGRLPDLRQSDGSSQWRAACGESCTCGSAGGSGLTP*