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SCNpilot_expt_300_bf_scaffold_1057

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1057_1
unknown

Not on your lists

comp(1..168)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1057_2
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

656..1114
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003778968
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1057_3
bacterium YEK0313, Bacteria

Not on your lists

comp(1615..2115)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037D998D
Uncharacterized protein {ECO:0000313|EMBL:CEJ16012.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1057_4
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2416..2910)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J2J6S2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJL56753.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group
isoprenylcysteine carboxyl methyltransferase
SCNpilot_expt_300_bf_scaffold_1057_5
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2989..3426
DNA (438bp) protein (146aa)
MerR family transcriptional regulator n=1 Tax=Burkholderia ubonensis RepID=UPI00016A4767
MerR family transcriptional regulator {ECO:0000313|EMBL:EPC03992.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halom
merR regulatory family protein
SCNpilot_expt_300_bf_scaffold_1057_6
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3440..3763)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=T0H5S7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP69771.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas pau
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1057_7
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3760..5682)
DNA (1923bp) protein (641aa)
UPI0003D59DBA related cluster n=1 Tax=unknown RepID=UPI0003D59DBA rbh
RNA-directed DNA polymerase {ECO:0000313|EMBL:ETI64602.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
RNA-directed DNA polymerase (Reverse transcriptase)
SCNpilot_expt_300_bf_scaffold_1057_8
unknown

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comp(6120..6239)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1057_9
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6274..6558)
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=T0HR36_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB18806.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lac
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1057_10
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6770..6934
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C5A7
Uncharacterized protein {ECO:0000313|EMBL:KEQ54799.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlor
SCNpilot_expt_300_bf_scaffold_1057_11
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6957..7328)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C59A
Uncharacterized protein {ECO:0000313|EMBL:KEQ54811.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlor
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1057_12
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7377..7667)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000381F74A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ71369.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wi
SCNpilot_expt_300_bf_scaffold_1057_13
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7998..9347)
DNA (1350bp) protein (450aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Sphingobium lactosutens DS20 RepID=T0J4I4_9SPHN rbh
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KFG89875.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" so
regulatory protein
SCNpilot_expt_300_bf_scaffold_1057_14
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9329..10108)
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Sphingomonadaceae RepID=T0J3Y1_9SPHN rbh
Mercuric reductase {ECO:0000313|EMBL:KFG89876.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicid
mercuric reductase
SCNpilot_expt_300_bf_scaffold_1057_15
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10121..10345)
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Sphingomonadaceae RepID=T0I3Q1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KFG89877.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium her
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1057_16
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10338..10697)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0I0I6_9SPHN
Mercuric ion transport protein, MerT {ECO:0000313|EMBL:KFG89878.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp
Putative membrane protein
SCNpilot_expt_300_bf_scaffold_1057_17
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10772..11188
DNA (417bp) protein (139aa)
MerR family transcriptional regulator n=1 Tax=Sphingobium lactosutens DS20 RepID=T0I354_9SPHN
Sphingomonas taxi strain 30a NODE_91, whole genome shotgun sequence {ECO:0000313|EMBL:KIU25827.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
transcriptional regulator, MerR family
SCNpilot_expt_300_bf_scaffold_1057_18
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11192..11935)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002D916A4
Uncharacterized protein {ECO:0000313|EMBL:KFG89880.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium her
Hypothetical protein y4eC
Displaying 18 items

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