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SCNpilot_expt_300_bf_scaffold_1074_5

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(4308..4964)

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD5A4 similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 216.0
  • Bit_score: 227
  • Evalue 1.10e-56
Recombinase {ECO:0000313|EMBL:KKC24517.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 189.0
  • Bit_score: 235
  • Evalue 9.40e-59
recombinase similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 187.0
  • Bit_score: 205
  • Evalue 1.20e-50

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Taxonomy

Sphingomonas sp. SRS2 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGATCGCCTCCGAAAACAGTCTCTTGTTTCTCTCTCCTAAATGGCTCATAAGGGGTGAGTTTTCGGAGGATCCTTTGTTAATAGGCTATGCGCGGCCCTCATTGCGGGATCAATCGCCAGAAACCCAACTCGCGGCTCTTGAAGAGGCGGGTTGCGAAAGGATTGTCATCGAGACGCTAACAGGCGCCCAACGAGACCGGCCTCAGCTGAGATGGGCGCTTGGCGGAATTTCCCAAGGCGATACTCTGGTAGTTTGGAAGCTCGATCGTCTGGCGCGGTCGCTTCGGCAACTCACGGAGACCATTGCTGAACTGCAGCAGAGGCATGTCAGCCTGCGGATATTAGATCCGGATTTGTCTTTGGAAATGACGTCGGGAGACATGGGGCTTCGCTTTTTTGCAGCCATTGCCGAATTTGATCGGGAGTTAGCGCTCGAAAAGTCCAGCAAAGGTCTAGCTGCGGCTAAGGCGCTTGGTCGCCGAGGAGGGCGCAAGCCAGCAATGGGGCCCACCGATATCAGCCGTGCAAAGCGCCTGCTGATGGACACCAATGTGACGGTGGAAGAGGTTGCCAAGCAGATGGGAGTTCAGCCTTCCACTTTATATCGGCACATCCCTGGTGGGCGCAGCTCGCTTGCGCACGTCTCAGACGGGTGA
PROTEIN sequence
Length: 219
MIASENSLLFLSPKWLIRGEFSEDPLLIGYARPSLRDQSPETQLAALEEAGCERIVIETLTGAQRDRPQLRWALGGISQGDTLVVWKLDRLARSLRQLTETIAELQQRHVSLRILDPDLSLEMTSGDMGLRFFAAIAEFDRELALEKSSKGLAAAKALGRRGGRKPAMGPTDISRAKRLLMDTNVTVEEVAKQMGVQPSTLYRHIPGGRSSLAHVSDG*