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SCNpilot_expt_300_bf_scaffold_1118_21

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 19550..20206

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TA56_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 203.0
  • Bit_score: 159
  • Evalue 4.70e-36
TonB-dependent receptor {ECO:0000313|EMBL:KGB55146.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 215.0
  • Bit_score: 284
  • Evalue 1.00e-73
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 212.0
  • Bit_score: 155
  • Evalue 1.50e-35

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Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGGCGAAAATAGCCGACCTGCGGCGGTTGGTCATCGTGTCGAGCGCGCTCACGCCGGCGCTTGCCATGCCGGCGACGGCATGGGCGCAGGAAGCTCCCGCCCCCGCATCGCAGGATTCGCAGGCAGCGCAGGCCGCCGGCGACATCATCGTCACCGCGCAGCGCCGCGAGCAGCGGCTTCAGGACGTGCCGGTCGCGGTGTCGGCGTTCAATTCCGAGCAGCTCAAGAGCAACAATATCGAATCCGTGCAGGATATCGCCGCCCGCACCCCCGGCCTCAGCATCGGCCAGGTCGATCCGATCAACCAGAATTTCTCGATGCGCGGCATCGGCAGCGCCTCGGGGATCAGCCAGAATGCCGGCGGCGACGCCTCGGTGGTGGTATTCGTCGACGGCGTCTATGCCGGGCGCGGCGGCATCCCCGATCTCGACGCCATGGATCTGGAGCGCGTCGAGGTGCTGCGCGGACCGCAGGGCACATTGTTCGGCAAGAATGCGATCGGCGGCATCGTCCAGTTCATCAGCCGCAAGCCTTCTGCCGATCCCTCGTTCCATATGGAGGGCACCTACGGCAATTATAACCGCTACAGCATCGTCGCCTATGGCAACACGCCGATCACCGACACCACCTTCCTGTCGGTCGGCTTCTCGCACAAG
PROTEIN sequence
Length: 219
MAKIADLRRLVIVSSALTPALAMPATAWAQEAPAPASQDSQAAQAAGDIIVTAQRREQRLQDVPVAVSAFNSEQLKSNNIESVQDIAARTPGLSIGQVDPINQNFSMRGIGSASGISQNAGGDASVVVFVDGVYAGRGGIPDLDAMDLERVEVLRGPQGTLFGKNAIGGIVQFISRKPSADPSFHMEGTYGNYNRYSIVAYGNTPITDTTFLSVGFSHK