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SCNpilot_expt_300_bf_scaffold_1320_6

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(3887..4444)

Top 3 Functional Annotations

Value Algorithm Source
ribosome recycling factor n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B33BE8 similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 185.0
  • Bit_score: 326
  • Evalue 1.40e-86
  • rbh
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1219050 species="Bacteria; similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 185.0
  • Bit_score: 324
  • Evalue 1.30e-85
ribosome-recycling factor similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 185.0
  • Bit_score: 322
  • Evalue 5.80e-86

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGGCGGCCTATGACAAGGCGGATCTGGAGCGCCGGATGCACGGCGCGGTCGAATCGCTGAAGGGCGATCTCGGCGGCCTGCGCACCGGGCGCGCCTCCGTCTCGCTGCTCGATCCGGTGACGGTGGAGGTCTATGGCGCGCACATGCCGCTCAACCAGGTCGCGACCGTCTCCGCGCCGGAGCCGCGCATGCTCTCCGTGCAGGTGTGGGACAAGTCGAACGTCGGGCCGGTGGAGAAGGCGATCCGCTCGGCGGGCCTCGGTCTCAACCCGATCAACGACGGGCAGAACCTGCGCCTGCCGATCCCCGATCTGACCGAGGATCGCCGCAAGGAACTGGCCAAGCTCGCCGGTCAATATGCCGAGAAGGCGCGCGTCGCCGTCCGCAACGTGCGCCGTGACGGGATGGACGCGCTCAAGACCGACGAGAAGAAGGGCGTGTTCGGCGAGGACGAGCGCAAGCGCCACGAGAATGAGGTGCAGAAGCTGACCGACAGCACGATCGCCGAGATCGACGCGGCGGCGGCGGGCAAGGAAAAGGAAATCCTCGGCAAGTGA
PROTEIN sequence
Length: 186
MAAYDKADLERRMHGAVESLKGDLGGLRTGRASVSLLDPVTVEVYGAHMPLNQVATVSAPEPRMLSVQVWDKSNVGPVEKAIRSAGLGLNPINDGQNLRLPIPDLTEDRRKELAKLAGQYAEKARVAVRNVRRDGMDALKTDEKKGVFGEDERKRHENEVQKLTDSTIAEIDAAAAGKEKEILGK*