ggKbase home page

SCNpilot_expt_300_bf_scaffold_1186_4

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 2773..3390

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B510EC similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 205.0
  • Bit_score: 365
  • Evalue 4.00e-98
  • rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 210.0
  • Bit_score: 310
  • Evalue 2.20e-81
50S ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 210.0
  • Bit_score: 305
  • Evalue 1.10e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas taxi → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
GTGAAGGTCAAGGTTTCCTCCTTCGACGCCAAGGCGAAGGCCGCGGAGGTCGAGCTTTCGGACGAGGTGTTCGGCCTCGATCCGCGCGCCGACATCCTGCACCGCGTCGTCACCTGGCAGCTCGAGAAGCGCCGCGCCACCGCGCGCGGCACCCGTGAGCGTTCGGACGTTGCGCGTTCGGGCAAGAAGCTCGGTCGCCAGAAGGGCGGCGGCGTCGCCCGTCACGGCGATCGCCGCGCTCCGGTGTTCATCGGCGGCGGCAAGGCGCATGGCGCCCGCGTTCGCGACTTCAATCCGTCGCTGAACAAGAAAATCCGCGCGCTGGGCCTCAAGATGGCGCTGTCCAGCCATGCTAAGGCGGGTTCGCTGATCATTCTCGACGGTTTCCAGGTCGCCAAGACCAAGGAACTGAAGGGTCATTTCGAGACGCTCGGCGTCGGCAAGCGTACGCTCGTCATCGACGGCGACGCGGGCGAGGCATTCCGTTCCGGCCGCAATCTGCCGGGCGTGGACCTGCTGCCGGCCGTGGGCGCGAACGTCTATGACATCATCAAGGCCGATACGCTGGTGCTGACCCGCGATGCGGTCGAGAAGCTGGAGGCGCGCTTCAATGGCTAA
PROTEIN sequence
Length: 206
VKVKVSSFDAKAKAAEVELSDEVFGLDPRADILHRVVTWQLEKRRATARGTRERSDVARSGKKLGRQKGGGVARHGDRRAPVFIGGGKAHGARVRDFNPSLNKKIRALGLKMALSSHAKAGSLIILDGFQVAKTKELKGHFETLGVGKRTLVIDGDAGEAFRSGRNLPGVDLLPAVGANVYDIIKADTLVLTRDAVEKLEARFNG*