name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_1186_1
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33..1229
|
tuf; elongation factor Tu (EC:3.6.5.3)
elongation factor Tu n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037A29EC
rbh
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacte
|
|
SCNpilot_expt_300_bf_scaffold_1186_2 |
Not on your lists |
1420..1728
|
30S ribosomal protein S10 n=3 Tax=root RepID=F3X0K1_9SPHN
rpsJ; 30S ribosomal protein S10
Ribosomal protein S10p/S20e {ECO:0000313|EMBL:AGU12267.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
|
|
SCNpilot_expt_300_bf_scaffold_1186_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2020..2769
|
50S ribosomal protein L3 n=1 Tax=Sphingomonas melonis RepID=UPI00037A6722
rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sp
50S ribosomal protein L3
|
|
SCNpilot_expt_300_bf_scaffold_1186_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2773..3390
|
50S ribosomal protein L4 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B510EC
rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo
50S ribosomal protein L4
|
|
SCNpilot_expt_300_bf_scaffold_1186_5 |
Not on your lists |
3383..3703
|
50S ribosomal protein L23 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3C902
50S ribosomal protein L23
Ribosomal protein L23 {ECO:0000313|EMBL:AGU12270.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
|
|
SCNpilot_expt_300_bf_scaffold_1186_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3703..4536
|
50S ribosomal protein L2 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B40DC3
rbh
rplB; 50S ribosomal protein L2
rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo
|
|
SCNpilot_expt_300_bf_scaffold_1186_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4536..4814
|
30S ribosomal protein S19 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00036A25EB
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
rpsS; 30S ribosomal protein S19
|
|
SCNpilot_expt_300_bf_scaffold_1186_8
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4814..5191
|
50S ribosomal protein L22 n=1 Tax=Sphingomonas sp. S17 RepID=F3X0J5_9SPHN
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S
rplV; 50S ribosomal protein L22
|
|
SCNpilot_expt_300_bf_scaffold_1186_9
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria
|
Not on your lists |
comp(5188..5820)
|
Folylpolyglutamate Synthase n=1 Tax=Acetobacter pomorum DM001 RepID=F1YSU2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIJ72365.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
|
|
SCNpilot_expt_300_bf_scaffold_1186_10
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5879..6313
|
50S ribosomal protein L16 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B49B5D
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S
50S ribosomal protein L16
|
|
SCNpilot_expt_300_bf_scaffold_1186_11
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6315..6518
|
50S ribosomal protein L29 n=1 Tax=Sphingomonas adhaesiva RepID=I0IW10_9SPHN
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
50S ribosomal protein L29
|
|
SCNpilot_expt_300_bf_scaffold_1186_12
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6534..6815
|
30S ribosomal protein S17 n=1 Tax=Sphingomonas aquatilis RepID=I0IW20_9SPHN
30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
|
|
SCNpilot_expt_300_bf_scaffold_1186_13
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6905..7273
|
50S ribosomal protein L14 n=1 Tax=Sphingomonas melonis RepID=UPI00036CB992
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S
50S ribosomal protein L14
|
|
SCNpilot_expt_300_bf_scaffold_1186_14
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7273..7590
|
50S ribosomal protein L24 n=1 Tax=Sphingomonas aquatilis RepID=I0IW21_9SPHN
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
50S ribosomal protein L24
|
|
SCNpilot_expt_300_bf_scaffold_1186_15
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7583..8167
|
50S ribosomal protein L5 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030C8738
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000313|EMBL:AJP72858.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphi
|
|
SCNpilot_expt_300_bf_scaffold_1186_16
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8208..8513
|
30S ribosomal protein S14 n=1 Tax=Sphingomonas adhaesiva RepID=I0IW13_9SPHN
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
rpsN; 30S ribosomal protein S14
|
|
SCNpilot_expt_300_bf_scaffold_1186_17
Sphingomonas adhaesiva, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8526..8921
|
30S ribosomal protein S8 n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035C8151
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=28212 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomona
30S ribosomal protein S8
|
|
SCNpilot_expt_300_bf_scaffold_1186_18
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8921..9412
|
50S ribosomal protein L6 n=1 Tax=Sphingomonas sp. S17 RepID=F3X0I5_9SPHN
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sp
50S ribosomal protein L6
|
|
SCNpilot_expt_300_bf_scaffold_1186_19
Sphingomonas adhaesiva, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9494..9754
|
50S ribosomal protein L18 n=1 Tax=Sphingomonas adhaesiva RepID=I0IW15_9SPHN
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=28212 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomon
rplR; 50S ribosomal protein L18
|
|
SCNpilot_expt_300_bf_scaffold_1186_20
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9758..10498
|
30S ribosomal protein S5 n=1 Tax=Sphingomonas sp. S17 RepID=F3X0I3_9SPHN
rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sp
rpsE; 30S ribosomal protein S5
|
|
SCNpilot_expt_300_bf_scaffold_1186_21
Sphingomonas aquatilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10504..10680
|
50S ribosomal protein L30 n=1 Tax=Sphingomonas aquatilis RepID=I0IW25_9SPHN
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=93063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sph
50S ribosomal protein L30
|
|
SCNpilot_expt_300_bf_scaffold_1186_22
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10779..11309
|
50S ribosomal protein L15 n=1 Tax=Sphingomonas elodea RepID=UPI00026305BC
rbh
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S
rplO; 50S ribosomal protein L15
|
|
SCNpilot_expt_300_bf_scaffold_1186_23
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11453..11980
|
preprotein translocase subunit SecY n=1 Tax=Sphingomonas melonis RepID=UPI000381C760
Suspect SCG annotation. See neighboring gene [SCNpilot_expt_300_bf_scaffold_1186_24].
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
preprotein translocase subunit SecY
|
|
SCNpilot_expt_300_bf_scaffold_1186_24
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11986..12759
|
Protein translocase subunit SecY n=1 Tax=Sphingomonas sp. S17 RepID=F3X0I0_9SPHN
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
preprotein translocase subunit SecY
|
|
SCNpilot_expt_300_bf_scaffold_1186_25
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12791..13438
|
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0L5_9SPHN
|
|
SCNpilot_expt_300_bf_scaffold_1186_26
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14418..14786
|
30S ribosomal protein S13 n=1 Tax=Sphingomonas melonis RepID=UPI000368BBAB
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
30S ribosomal protein S13
|
|
SCNpilot_expt_300_bf_scaffold_1186_27
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14892..15281
|
30S ribosomal protein S11 n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037D5867
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
30S ribosomal protein S11
|
|
SCNpilot_expt_300_bf_scaffold_1186_28
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15373..16434
|
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Sphingomonas melonis RepID=UPI0003812FDB
rbh
|
|
SCNpilot_expt_300_bf_scaffold_1186_29
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16645..17067
|
50S ribosomal protein L17 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002FED7EC
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S
50S ribosomal protein L17
|
|
SCNpilot_expt_300_bf_scaffold_1186_30
unknown
|
Not on your lists |
17204..17818
|
This feature has no annotations |