ggKbase home page

SCNpilot_expt_300_bf_scaffold_1186_10

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 5879..6313

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L16 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B49B5D similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 144.0
  • Bit_score: 285
  • Evalue 2.20e-74
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 144.0
  • Bit_score: 282
  • Evalue 3.40e-73
50S ribosomal protein L16 similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 144.0
  • Bit_score: 278
  • Evalue 1.30e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas parapaucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
GTGCTGCAACCGAAGCGCACCAAGTTCCGCAAGGCGTTCAAGGGCCGTATCCACGGCGACGCCAAGGGCGGCACCGCGCTCAACTTCGGGGCCTATGGCCTCAAGGCGATGGAGCCGGACCGGATCACCGCGCGCCAGATCGAGGCGGCCCGCCGCGCGATCACGCGCCACATCAAGCGCCAGGGGCGCTTGTGGATCCGCGTGTTCCCGGACGTGCCGGTTTCGTCGAAGCCCGCCGAAGTCCGCATGGGCTCGGGCAAGGGTTCGCCCGAATTCTGGGCGGCGCGCGTCAAGCCGGGCCGTATCCTGTTCGAGCTGGACGGTGTTCCGGGTCCGCTTGCCGCCGAAGCGTTCGAGCGCGCGGCGATGAAGCTCCCGATCAAGACCAAGGTCGTGGCGCGTCTCGGCGACACGTCGCACCTCGGAGGCGAGTAA
PROTEIN sequence
Length: 145
VLQPKRTKFRKAFKGRIHGDAKGGTALNFGAYGLKAMEPDRITARQIEAARRAITRHIKRQGRLWIRVFPDVPVSSKPAEVRMGSGKGSPEFWAARVKPGRILFELDGVPGPLAAEAFERAAMKLPIKTKVVARLGDTSHLGGE*