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SCNpilot_expt_300_bf_scaffold_1186_28

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 15373..16434

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 355.0
  • Bit_score: 657
  • Evalue 1.20e-185
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 355.0
  • Bit_score: 650
  • Evalue 2.30e-184
DNA-directed RNA polymerase subunit alpha n=1 Tax=Sphingomonas melonis RepID=UPI0003812FDB similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 355.0
  • Bit_score: 658
  • Evalue 3.00e-186
  • rbh

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Taxonomy

Sphingomonas taxi → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
TTGTCCGTCAACGCAAAGAACTGGCAGGAACTGAAGAAGCCCAACGCGCTCGAGAAGAAGGGCGGCGACGGGAAGCGCAAGGCGACCTTCGTCGCCGAGCCGCTCGAGCGCGGCTTCGGCCTGACGCTCGGCAACGCGCTGCGCCGGGTCCTTCTGTCCTCGCTTCAGGGCGCCGCCGTCACCTCGATCAAGATCGAGAACGTGCTGCATGAATTCAGCTCGCTCGCCGGCGTGCGCGAGGATGTCACCGACATCGTGCTGAACGTCAAGCAGGTCGCGCTGAAGATGCAGGGCGAAGGGCCGAAGCGGCTCCAGCTTTCCGCCACCGGTCCGGCCGCCGTGACGGCGGGTGACATCGCGGTGAGCGGCGATATCGAGGTGATGAACCCCGATCTCGTCATCTGCCACCTTGACGAGGGCGCGACGCTCAACATGGAGCTGACCGCCGACGTCGGCAAGGGATACGTCCCGGCCGTCGCCAACCGTCCGGCCGATGCGCCGATCGGGCTGATCCCGGTCGATGCGCTTTATTCGCCGGTGCGTCAGGTCAGCTACAAGGTCGATCCGACCCGCGTCGGTCAGGACCTCGATTATGACAAGCTCACGCTGTCGCTCGAGACCGACGGCACGGTGACGCCGGAGGACGCGCTCGCTTATGCCGCGCGCATCCTGCAGGACCAGCTCGCGTTGTTCGTCCACTTCGACGATTCGGCGATCGCGCGCTCGGCCCCGATCGGCGTCGCGGCCCCGGCCGCCGGCGCGGAGCCGCAGGGCGACACGCAGCAGATCAACCGCTACCTGCTCAAGAAGGTCGATGAGCTGGAGCTGTCGGTCCGTTCGGCGAACTGCCTGAAGAACGACAACATCATCTACATCGGCGATCTCGTCGGCAAGACCGAGGCGGAGATGCTGCGCACCCCGAACTTCGGCCGCAAGTCGCTGAACGAGATCAAGGAAGTGCTGTCGTCGATGGGCCTGCGCCTTGGCATGGAAATCCCTGGCTGGCCGCCGGAGAACATCGAGGAAATGGCCAAGAAGCTCGAGCAGGAGATCATGGGCTGA
PROTEIN sequence
Length: 354
LSVNAKNWQELKKPNALEKKGGDGKRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAAVTSIKIENVLHEFSSLAGVREDVTDIVLNVKQVALKMQGEGPKRLQLSATGPAAVTAGDIAVSGDIEVMNPDLVICHLDEGATLNMELTADVGKGYVPAVANRPADAPIGLIPVDALYSPVRQVSYKVDPTRVGQDLDYDKLTLSLETDGTVTPEDALAYAARILQDQLALFVHFDDSAIARSAPIGVAAPAAGAEPQGDTQQINRYLLKKVDELELSVRSANCLKNDNIIYIGDLVGKTEAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMEIPGWPPENIEEMAKKLEQEIMG*